Oncorhynchus gorbuscha (pink salmon): 124026258
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Entry
124026258 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124026258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124026258
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124026258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ANAPC3
TPR_8
ARM_TT21
TPR_7
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
124026258
NCBI-ProteinID:
XP_046195313
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MADNNTDQEKAIAANALEAFTAGNYEESLKHLGKLQELNKEDYKIALNKAIAEFYKSGQT
TTCTLKQTLIAMKNQVHTSMEDIDGLDDVENSLLYYNQAIIHYHMRQYSEAIAIGERLYH
FLEPFEEKFALAVCFLLVDLYLLTYQPEKALHLLAVLEKLSVQGNNKNGKGSVNKDGRNQ
KAEFIDMIEAAKSKMHQYKVRAYIQMKSSKACKREIKSVMNTAGNSASSLFLKSNFEYLR
GNYRKAVKLLNSSNIAEHPGAIKTGECVRCMFWNNLGCIHFAMGKHNLGIFYFKKALQEN
DHTCAQLGDGGATGNGQSKQFSGIPMCALLANKRYELLYNCGIQLLHIGGPXAAFDCLMD
AVQVYHSNPGLWLRLAECCIAANKGSLEQDNKGLPSXKGIVQAIVGQGYHRKIILASQST
QNTIYSDGQSAAIPVASMEFAAICLRNGLVLLPDHQQQENKAENGSKTTSQSGSTESGSE
NSDACSGKGQEGDKFLSAAPSSPLRKQEVENLRCSLLACSAYVALVLGDNLMALNHAEKL
LHQTKLSGSLKFLGHLYAAEALISLDRISEAIGHLNPENVTDVSMGVLSSEQDQGPDKGD
LEPVESCEKQTPLCYPSTVSSARAIMLFNLGSAYCLRSEYEKARKCLHQAASMVNTKEIP
PEAILLAVYLELQNGNTQLALQIIKRNQLLPSVLQAPSPDTRKKPVPSSFQPVQPPIQMP
SPFTTVQRK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacaacacagaccaagaaaaagcaatagctgcaaatgcgttggaggcgttt
acggctggaaactatgaggaatctttgaaacaccttgggaagttgcaagagttgaacaag
gaggactacaagattgctttgaataaagcaatagctgaattctacaagagcggccaaacc
accacatgcaccctgaagcagactcttattgcaatgaaaaaccaggttcacacttcaatg
gaggatattgatggtttggatgatgtagaaaacagtcttctctactacaatcaagctatc
attcactaccacatgagacagtactctgaagctattgctattggagagaggctgtaccat
tttctggagccgtttgaagagaagtttgctctggcggtctgcttcttgctggtggatctg
tacctgctaacgtaccagccagagaaggccctccatctccttgctgtgctggagaaactg
tctgtacagggaaataacaagaacggcaaagggagtgtcaacaaagatggtcggaaccag
aaggcagagttcattgacatgatcgaagcggctaaatccaaaatgcaccagtacaaagtg
cgagcgtacattcagatgaagtcatcaaaggcctgcaaaagggagatcaagtctgtgatg
aacacagcagggaattctgcttcctcactcttcctcaagagtaactttgagtacctgaga
ggaaactaccgcaaagcagtgaagctcttaaacagctccaacatcgcagagcaccctggg
gccatcaaaacaggtgaatgtgtgcgctgtatgttctggaacaatctgggttgcatacac
tttgccatggggaaacacaacctaggtatattctacttcaaaaaggccctgcaggagaac
gaccacacgtgtgcacagctgggggacggtggggcgacggggaacgggcaatctaagcag
ttctcgggcatccccatgtgtgcactgctagccaacaagcgttatgagctgctgtataac
tgtgggatccagctgctgcacatcggcggccctnnggcggctttcgactgtctgatggat
gctgtgcaggtgtaccactctaaccctggcctctggttacggttggcagagtgctgcatt
gctgccaacaagggtagcttagaacaagacaacaagggtcttccgagtnaaaagggcatt
gttcaggccatcgttgggcagggctaccatcgcaagatcatcctggcatcacagtccacc
cagaacacaatctacagtgatgggcagtctgcagccattccggtggccagtatggagttt
gcagcgatctgtctgaggaacggcctggtcctcctccctgatcaccagcagcaggagaac
aaggcagagaacggctccaagacaaccagccagtcaggcagcacagagagcggctcagag
aacagcgacgcctgcagtgggaagggtcaagaaggagacaagttcctttctgcagcaccg
tcttcacctctgaggaaacaggaggttgaaaacctcaggtgttccctcctggcctgcagt
gcctacgtggccctggtgttaggagacaacctgatggccctgaaccatgcagagaagctc
cttcaccagaccaagctgtctggatcactcaagttcctgggacacctgtatgctgcagag
gccctcatatccctggaccggatctcagaggccatcggtcacctcaacccagagaatgtc
actgatgtctccatgggggtgttgtccagcgagcaggaccaagggccagataaaggggat
ctggagcctgtcgagtcatgtgagaagcagactcctctgtgttaccccagcacagtgagc
tcagcccgggccataatgctgttcaacctgggcagtgcctattgtctgaggagtgagtac
gagaaggcccgcaagtgcctgcatcaggccgcctccatggtgaacaccaaggagattcct
cctgaagccatcttactggctgtctacctggagctgcagaacgggaacacacagctcgcc
ctacagatcatcaaacgtaaccagctcctcccctcagtgctccaggcgccctctccagac
acacgaaagaagcctgttccctcctccttccagcctgtccaaccacccatccagatgccc
tcacccttcacaacagtccagcgcaaatga
DBGET
integrated database retrieval system
