Oncorhynchus gorbuscha (pink salmon): 124027299
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Entry
124027299 CDS
T07892
Name
(RefSeq) homeobox protein TGIF1-like
KO
K19553
homeobox protein TGIF2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124027299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124027299
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124027299
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
124027299
NCBI-ProteinID:
XP_046195716
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All DBs
Position
LG03:18834106..18841702
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AA seq
457 aa
AA seq
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MKPLKRALEEEQIRELSSAMSDSDPFEDDGFPLDLSGGGVASGKRRRRGNLPKEAVIVLR
TWLYEHRYNAYPSEQEKLSLSVQTSLSVLQICNWFINARRRLLPDLLRKDGKDPTHFTIS
RRAGKGEGRSSTGGGGSSPESPTSSVPSPALPPLRPSVIRPAPTLDLSLLGNTATAILTG
AGYPGQEGCCVQALMQLDMHVLLREVEEKGSTVISASPTGGLFNTPPPTPPELCPGQDFS
DLRLLVDTALQRAAEHESQTNATTEATVCSSAMGLTLPPELSQATLNSPREQSPTEKAVV
SAVSVPSPGTVSSAPTLTPAFSFIPAPSLPPRQAQIPVLVPVSTPVPTFIPAPIKPPVSA
LSPVQTFPPSLTLSPVPISSPTLALVQAPPPALTPFLGLSSSIPSSSSVQRAQSVASVWS
MVHSDVPVRQPGPVAQTPIATVWGAQHTLHAVSETVN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccctaaaacgagctctggaagaggagcagatacgggagctgtcgtcagccatg
tctgacagtgacccctttgaggatgatggctttccccttgacctgtcagggggcggcgtg
gcctctggtaagcggcgtcgccgtggcaacctgcccaaggaggcggtgattgtgctgcgg
acctggctgtatgagcaccgctacaacgcctacccttcagagcaggagaaactcagcctg
tcagttcagaccagcctctccgtgctacagatatgcaactggttcatcaacgcccgtcgc
cgcctcctccctgaccttctccgcaaggacggcaaagaccccacccatttcaccatctcc
aggcgggcaggaaaaggtgagggtcgctcatccactggtggtggaggtagctcccctgaa
agccccacctcctcggtcccctcaccagccctgcccccactccggccctcggtcatccgg
ccagcccccacgctggacctcagcctcctgggcaacacagccacggccattctgacggga
gccggctacccaggccaagagggctgctgcgtccaggccctgatgcagctggacatgcac
gttctcctgagggaggtcgaggagaagggctctacggttattagcgccagtcccactggc
gggctattcaacacgccaccccccacccctccggagctgtgccccggccaggacttcagt
gacctgaggctgctggtggacacagctcttcagagggccgctgagcatgagagtcagact
aatgccacaacagaggccacggtctgcagcagtgctatgggtctgacccttccaccagag
ctgagccaagcgacgctgaactcgcccagagagcagagtcccacggaaaaggctgtggtg
tccgcagtttcagtcccaagccccggcacggtctcttcagcacctacactcaccccagcc
ttttccttcattcctgcgccaagtctgcctcctcgccaggcccaaattccagtcctagtg
ccagtttcaacccctgtcccaaccttcatcccagcaccaatcaaacctcctgtgtcagcc
ctaagccctgttcaaactttccccccttcactaactttatcccctgtcccaatctcatcc
ccaactttagccctagtccaagcacctccgccagccctcaccccattcctaggcctttct
tcctccatccccagcagcagcagtgtccagagggcccagtcggtggccagtgtgtggagc
atggtccacagcgatgttccagttcgacagcctggtcccgtggcacagactcccatagcc
acagtgtggggggcgcagcacaccctgcatgctgtcagcgagacagtcaactag
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