KEGG   Oncorhynchus gorbuscha (pink salmon): 124027475
Entry
124027475         CDS       T07892                                 
Name
(RefSeq) WD repeat-containing protein 1-like
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ogo04990]
    124027475
Domain-containing proteins not elsewhere classified [BR:ogo04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   124027475
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C eIF2A Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 PEP5_VPS11_N Beta-prop_NUP159_NUP214 RMC1_N NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_1st PROPPIN Beta-prop_ELP1_1st Beta-prop_WDR11_1st DUF5711 WD40_RFWD3 Beta-prop_DCAF12 DUF7165 HPS3_N PQQ
Other DBs
NCBI-GeneID: 124027475
NCBI-ProteinID: XP_046195849
LinkDB
Position
LG03:complement(20603082..20622374)
AA seq 606 aa
MTYDLKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKIINSVDIKQTRPYRLITGSDDNCGAFFEGPPFK
FKFSSTDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKLGALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSMALTTFNMGADVMDQQLGCLWQKDHLLSISLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNKGRAYIYSGSHDGHINYWDAETGENNCFS
GKGHSNLVTKMAVDEADQLVTCSMDDTVRFTSMTKKEYSASNLVKMDVQPKHVSVATGGL
TLAVCIGQVVLLKDQKKVFMLDSLDYEPEAGAIHPGGSTAAVGGADGKVHLYSVQGNTLK
DEGKSMEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADDYSVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASIK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgacctatgatttgaagcatgtatttgccagcctcccgcagatggaacgaggagttgcc
aaagtccttggtggagatcccaaaggcaacaacttcctctacaccaatgggaagagtgtc
atcatcaggaacatagataaccctgccatagctgacatctacaccgagcaccctcatcaa
gttactgttgccaagtatgctcccagtggcttctacattgcgtctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggagcaccttctgaagtacgagtaccagcct
tttgggggcaaaatcaaggacatcgcctggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagtttggggctgtgttcctgtgggacactggctcctcagtgggc
gagatctcgggccactccaaaatcatcaacagcgtggacatcaagcagactcgtccctac
cgcctcatcaccggtagtgatgacaactgtggggccttctttgagggaccccctttcaag
ttcaagttctcaagcacagaccacagccggtttgtcaactgcgtgcgtttctctccagac
gggaaccgcttctgtactgctggcgctgacggtcagatcttcctatacgacggaaagact
ggcgagaagcttggggctctgggcggagcaaaggcccacgaaggaggagtctatgccgtg
agctggagccctgacagctcccagctcatctctgcctcgggtgacaagactgtgaagctg
tgggatgtgggcaccagcatggccctgaccaccttcaacatgggcgccgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccacctgctcagcatatccctgtcgggctac
atcaactacctggataagagcaaccccgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgacagttcacaaaaacaagggaagggcttacatctactctggc
agccatgacgggcacatcaattactgggatgccgagaccggggagaacaactgcttctca
gggaagggccacagcaaccttgtcacaaagatggcggtggatgaggccgaccagctggtg
acttgcagcatggatgacactgtccgcttcaccagcatgacaaagaaagaatacagtgct
tccaacctggtaaagatggatgtccagcctaaacatgtttccgtagcaacaggggggctc
acattggcagtgtgcattggacaggtggtgttgctgaaggaccagaagaaggtgttcatg
ctggacagtctggactacgagcctgaagcaggagccatccacccaggaggcagcactgcg
gcagtgggcggagcagatgggaaggtccacttgtattctgtccaaggcaacactctgaag
gatgaggggaagagcatggaggccaaagggccagtcacagacatggcctactccaaagac
ggagcctacctggccgtcactgatgagaagaaggtcgtcacagttttcactgtggcggat
gattactcggtcaaaaatgatttttatggacaccacgctaaagtagttaccttggcctgg
tcccccgacaatgagcactttgccagcggtggaatggacatgatggtctacgtttggaca
gtgaatgatgcagacaagaggctgaagatcccagatgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgaacacacgctagtgaccacctctcatgacgccagcatcaag
cagtggactcttaaattctga

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