Oncorhynchus gorbuscha (pink salmon): 124027537
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Entry
124027537 CDS
T07892
Name
(RefSeq) Bardet-Biedl syndrome 4 protein-like isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124027537
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124027537
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
124027537
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
BBSome
124027537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
TPR_14
ANAPC3
TPR_17
TPR_12
TPR_16
TPR_9
TPR_CcmH_CycH
TPR_7
TPR_15
ARM_TT21_2nd
TPR_Slam
ARM_TT21_N
ARM_TT21_4th
NatA_aux_su
TPR_10
TPR_20
HrpB1_HrpK
Wzy_C_2
ARM_TT21_C
PknG_TPR
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
124027537
NCBI-ProteinID:
XP_046195902
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MHPQRGMVKKVAGCRPGVAPKLRLIDLPLFQLPVASETKKRQAPKAPELPILERRNWLIH
LHYIRKDYEICKAMIKEQLQETQGMCEYAIYVQALILRLEGQIQPSLELFQSCAILNPTS
PDNLKQVARSLFLLGKHKAAIEVYHEAGKLNEKDWEINHNLGVCYSFIKDFQNSEQQLNA
ALQLKKHDRTFMTLGKVHLLAGDTDKAIEVYKSAVEFSPENAELLTTLGLLYLQLGKYQK
AFEHLGNALTHDPNNYKAILAAGSMMQTHGDFDVAMNKYRVAACMVPESPPLWNNIGMCF
FGKKKYVAAISCLKRAHYLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAATNLQPHLGEL
YMLLAVALTNLEDVDNARRSYEQAVALDQSNPLVNLNFAILLYNHGDKKGALQQYQEMER
KVNILKDSNTEFDPELMDMAQKMATALQVGESLEWTKPVKDPKSKQRSAGAPSKTPGSSQ
QPLGTNQALEQAMSSAAGYNKSITLPTGVSPHSQPTPPSLALEEEPDVETTPTRAPQPEE
SDPSTTMPPLAAKPKVKKNK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctcagaggggaatggtgaagaaggtggcaggatgcaggccaggagttgctcca
aaattgagactcattgatctccctctttttcagctcccagtggcctctgagacgaagaaa
cggcaagctccaaaagctccggaacttcccattctggagaggagaaactggctcatccac
ctgcactacatccgcaaagactatgagatctgcaaggcaatgatcaaagagcagctacag
gagacccagggaatgtgtgaatatgccatatatgtacaagctctaatcttgcgtctggag
gggcagatccagccatccctggagctgttccagagttgtgccattctcaatcccaccagc
cccgacaacctcaaacaagtggcccgatcactttttctgttggggaaacacaaggcagcc
attgaggtttatcatgaagctgggaagctcaatgagaaagactgggagatcaaccataat
ctgggtgtatgctattccttcataaaagacttccaaaattctgaacagcagttgaatgca
gccctgcagttgaaaaaacacgacaggacattcatgacactgggaaaggtccacttgttg
gcgggagacacggacaaagccattgaagtgtacaagagtgcagtggagttctctccagag
aatgcagagttgctgaccactctggggctcctgtatctgcagttgggaaaataccaaaaa
gcatttgaacatctcgggaatgcacttactcatgaccctaataactataaggccatcctg
gcagcaggcagtatgatgcagacccatggggactttgatgtggccatgaacaagtaccgc
gtggcagcgtgcatggtccccgagagccccccgctctggaacaacatcggcatgtgcttc
tttggcaagaagaaatatgtagcagccatcagctgcctgaagcgggcccactacctgtct
ccgtttgactggaaggtactgtacaacctgggcctggtgcacctcaccatgcagcagtat
gcctctgccttccacttcctcagcgctgccaccaacctgcagccccacctgggagaactc
tacatgctactagcagttgcactgaccaatctggaggacgtggacaatgccaggagatcc
tatgaacaagctgtggctttagaccagtccaaccctctggtcaacctgaactttgccatt
ctgctgtacaaccacggggacaagaagggagccctgcaacagtaccaggagatggaaagg
aaagtcaacatactgaaggacagcaacacagagtttgaccctgagctaatggacatggct
cagaagatggccactgccttgcaggtgggagagagcctggagtggaccaagccggtcaaa
gaccccaagtctaagcagcgctcggctggggcccccagtaaaacccctggcagctcccag
cagccgctaggcaccaaccaggccctggagcaggccatgtcctccgccgcaggctacaac
aagagcatcacactccccacaggagtgtccccccacagccagcccacgcccccctccctg
gccttggaggaggagcctgatgtggagaccacccccacccgagcccctcagccagaagag
tcagacccctccaccaccatgccccctctggcagccaaacccaaagtcaagaagaacaag
taa
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