Oncorhynchus gorbuscha (pink salmon): 124028305
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Entry
124028305 CDS
T07892
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124028305
04518 Integrin signaling
124028305
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124028305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ogo00536
]
124028305
Glycosaminoglycan binding proteins [BR:
ogo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124028305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_Teneurin
FN3_Tor_3rd
EGF_TEN
Fn3_Dep-1_2nd
Fn3_Dep-1_3rd
EGF_2
Motif
Other DBs
NCBI-GeneID:
124028305
NCBI-ProteinID:
XP_046196366
LinkDB
All DBs
Position
Unknown
AA seq
1495 aa
AA seq
DB search
MLFSLGLLFLLTPFPSLQTPVTNEKRNATGTGSEPKPYVLLTLAKPKTAATLVKVTKETP
KPTLKALNPAAANQTHPAPSSPIKPPTATLVKLTKETPKPTLKALSPTIANQTHPAPSSP
IKPPTATLVKLTKETPKPTLKALSPTIANQTHPAPSSPIKPPTATLVKVTKETPKPTLKA
LSPTIANQINPAPSTPLKPPTATLVKLTKETPKPTVKALSPTAGTQTHPAPSTPLKPPTA
TLLQPIRHIQPLDPLKPPTATFIKFTKETPKPTVKALSPTAANQTHPAPSTPLKPPTATL
VKLTKETPKPTPKTLNPAAVNQTHPAPSTPLKPPTATFIKLTKETLKPTVKALNPTATNQ
THPAPSTPLKPPTATLVKLTKETPKPTVKALSPTEANQILPAPSTPLKPLTASGPKTTTK
DKPSITMPHPIPIKVLITSDSGCISKDTQSDASNRTKEQTQTHELKLKPGFPLTLTHRIS
LVPTSCTGGCVAEMAALKGRVGRLEKEMSLMKSKCASCSKAPCHNDCSANGKCEKGKCVC
LPGFLGLDCSKCTAGADCSKKGTKDKIQITVETVALKASPESSAITESLQGKKTKADQIL
FQKKTEQKKPTAAKEDGDIKSKTKGTTSVKAGLTKTQAKQGVTVTKTKTTHSNATKTGLG
RPTVGQVLLKHHGGRKQESKGKTTVIKKLSKPDLKLKGTVKEESGGKANAEAGNLQDQPQ
DNVTQSTVKTFVNKTRSGKETLEQSTLAEKNVTLTSGKKTVKNVKLVQGTMNVTKVSLAF
DITKAGTGKITLTKDIKTEADISSGTSKTTVKTGSGKGKPVPRKSQYVVNMTTVETTSEV
KVFSNKTATIQSSKNTTRKAGTGVGRGLGSVKVQNITTYGFTLTWSAPTAMFKNFTVSRR
VHRAEGEEEEEEEAEEGAALREEDRVAGVVNSTIEIRKQSPNGTVAFPTKAPGSSRGKAH
TKRVSVVLPDSVRSVEFSNLRPQTRYSLHICGTTPGSRSKIHRVTTMTGPEPPTELVFSN
VTEASLSVSWSKPKNKISGFKITYSHSVTGESGSVSVDSLQSQVSLSKLSSGATYEVSVM
SIMGKRESDPLIAIMTTVPAPPTVLQAMNVTDTKAVLQWTPAMGQVDRFIISYESAKTPN
VTVTVMVSGNSVEQQLRGLQRDTVYTVKALSQKDSLQSTAITTTFTTASAVKAGEVGARS
AVVSWKSPSVAFSRYRVTYQTAGEEVKEVILDSTVTEYKLTGLFSMSKYTVLVQAEREGQ
YTSIVTTEFITGKLRFPFPTECSQELLNGALQSGEVDLYPEGKEGKAVRVYCDMETEGGG
WTVFQRRMNGKTDFFRTWSDYTNGFGNLSEEFWLGNELLHNLTSMGPVSLRVDLRSGNDT
AYAHYSSFTIDSVEKHYAIEVSGYTGTAGDSMRYHNGRPFSTRDKEPLPLGIHCARAYMG
GWWYKNCYKTNLNGLYDTKSNNQGVVWIDWKGKDSSIPFTEMKFRPAGISITTHG
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttctctaggcctcctcttcctgctaaccccgttcccctctcttcaaactcca
gtaaccaatgagaaaagaaacgccacaggaacaggaagtgaaccgaaaccctacgtccta
ctcaccctcgcaaaaccaaaaaccgcagccacgcttgtgaaagtcaccaaagagacccct
aagcccactctgaaagccctaaacccagctgcagccaatcagacacatccagccccctca
agccccatcaaacctccaacagccacgctcgtcaaactcaccaaagagacccctaagcct
actctgaaagccctaagcccaactatagccaatcagacacatccagccccctcaagcccc
atcaaacctccaacagccacgctcgtcaaactcaccaaagagacccctaagcccactctg
aaagccctaagcccaactatagccaatcagacacatccagccccctcaagccccatcaaa
cctccaacagccacgctcgtgaaagtcaccaaagagacccctaagcctactctgaaagcc
ctaagcccaactatagccaatcagattaatccagccccctcaacccccctcaaacctcca
acagccacgctcgtcaaactcaccaaagagacccctaagcccactgtgaaagccctaagc
ccaactgcaggcactcagacacatccagccccctctacccccctcaaacctccaacagcc
acgctcctgcagccaatcagacacatccagcccctcgacccccttaagcctccaacagcc
acgtttattaaattcaccaaagagacccctaagcccactgtgaaagccctaagcccaact
gcagccaatcagacacatccagcaccctctacccccctcaaacctccaacagccacgctc
gtcaaactcaccaaagagacccctaagcccactccgaaaaccctaaacccagctgcagtg
aatcagacacatccagccccctcgactcccctcaagcctccaacagccacgttcatcaaa
ctcaccaaagagacccttaagcccactgtgaaagccctaaacccaactgcaaccaatcag
acacatccagccccctcaacccccctcaaacctccaacagccacgctcgtcaaactcacc
aaagagacccctaagcccactgtgaaagccctaagcccaaccgaagccaatcagattctt
ccagccccttcaacccccctcaagcctctcacagccagtggtccaaagaccacaaccaaa
gacaaaccctccatcacaatgccgcatcccatccccatcaaggtgctcatcacttctgac
tctggctgcatcagtaaggacacccagagcgacgctagcaaccgcaccaaggagcagacc
cagacccatgagctgaagctgaagcctggctttcctctaaccctgacccaccgcatcagt
ctggttcctacctcctgcaccgggggatgtgtggctgagatggcagcactgaaaggacgt
gttggcaggctggagaaagagatgtccctcatgaagagtaaatgtgcttcctgctccaaa
gccccatgtcacaatgactgcagtgcgaatgggaaatgtgagaagggaaagtgtgtctgc
ctcccagggttccttggtctagactgcagtaaatgtacagctggagctgactgcagtaaa
aaaggtaccaaagacaaaatccagataacggtggagacggtggcgttgaaggcatcacct
gagagcagtgctatcacagagagtctgcaggggaagaagaccaaagcagaccaaatcctc
ttccagaagaaaacagagcaaaagaaacctacagccgccaaagaggatggtgacatcaaa
agcaaaacgaaagggaccacaagtgtaaaagcagggctcaccaagacacaagccaaacaa
ggggttactgtcactaaaaccaaaaccacccattccaatgctaccaagactggactgggc
cgaccaaccgtcggacaggttctgttgaaacaccatggaggaagaaagcaagagagcaaa
ggcaaaacgacagttataaagaagctgtctaaacctgacctgaagttgaaaggaacagtg
aaggaggaatctggaggtaaagccaatgctgaagctggcaacctccaagaccagcctcaa
gacaatgtcacccaaagcactgtgaagacgtttgtgaacaaaacccggtcaggaaaagag
actctggagcagtcgacgttggctgagaagaatgtgactctaacatctggaaagaaaaca
gtcaaaaatgtgaaattagttcaggggactatgaacgttacaaaggtgtcattggctttt
gatatcactaaggctgggacgggcaagatcacccttacaaaggacattaagacagaggca
gacatctcctcaggcacatctaaaactactgtgaagacagggtcaggcaaagggaagcca
gtcccacggaagagtcagtatgttgtgaacatgaccactgtggagaccacctctgaagtc
aaagtcttcagcaacaagacagcaactatccagtcttccaaaaacaccaccaggaaagca
ggaacaggagtgggccgtggacttggctctgtgaaggttcagaacatcaccacgtacggc
ttcaccctcacatggtcggccccaacagccatgtttaagaacttcactgtgtccagaaga
gtgcacagggcagagggtgaggaagaggaggaggaagaggcggaggagggagctgctctc
agggaagaggacagagtagctggagtcgtaaactccaccattgagatccgaaaacagagc
cctaatggaaccgtggctttccccactaaagctcccggtagctccagaggtaaagctcac
acaaagagggtgtccgttgttctccccgacagcgttcgctctgtggagttcagtaacctg
cgacctcagactcgatactccctgcacatatgtggcaccactcccggatcccgctccaag
attcacagagtaaccaccatgacaggacctgagccaccgactgagctggtgtttagtaac
gtgacagaagcatctctttctgtgtcctggtccaaaccaaagaacaaaatctccggcttc
aaaatcacatactctcactcagtcacgggagagagtggttctgtgtctgtggattccctg
cagtcccaggtgtctctgtccaagctgtcctcgggggccacgtacgaggtcagtgtgatg
tccatcatggggaagagagagagtgatcccctcattgccatcatgaccacagtacctgcc
cctccaactgttctccaagcaatgaacgtaacagataccaaggcagtgctgcaatggacc
cccgccatgggccaagtagaccgcttcatcatcagttatgagtctgcaaaaactcccaat
gtaacagtgacagtgatggtgtctggtaactcagtagagcagcagctgagagggctgcag
agagacaccgtgtacacagtcaaagccctgagtcagaaagacagtctgcagagcacagcc
atcactaccaccttcacaacggccagtgctgtgaaggccggtgaggtgggcgctcgttct
gctgttgtatcatggaaatcccccagtgttgcgttcagcagatacagagtgacctatcag
acggcaggagaggaggtcaaggaggtgattctggactccacggtgacggagtacaagctg
actggactgttctctatgtctaagtacacggtgctggtacaggcagagagagaggggcag
tacacatctattgtcaccactgagtttatcacaggaaaactgcgcttcccattccccacg
gagtgttcccaggagctgctgaacggagcgctccagtcaggagaggtggatctttaccca
gagggcaaggaagggaaggcagtcagagtctactgtgacatggagactgagggaggaggc
tggacagtgttccagaggagaatgaacgggaagacagatttcttcagaacctggagtgac
tacactaatggctttggaaaccttagcgaggagttctggctcggtaatgagctgcttcac
aacctgaccagcatgggcccggtgagcctgagagtggacctgcgttcaggcaacgatacg
gcctacgcccattactccagcttcaccatcgactcagtggaaaaacactacgccatcgag
gtgtctggatacaccggcactgcaggtgactccatgaggtaccacaacgggcgcccattc
tccaccagagacaaggaacccctccccctgggcatccactgtgccagggcctacatgggc
ggctggtggtacaaaaactgctacaagaccaacctcaacggcctctatgacaccaaaagc
aacaaccagggtgtggtgtggatagactggaagggcaaagactcgtccattccctttact
gagatgaagttccgaccggccgggatctccatcacaacccacggataa
DBGET
integrated database retrieval system