Oncorhynchus gorbuscha (pink salmon): 124028639
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Entry
124028639 CDS
T07892
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48-like isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124028639
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124028639
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124028639
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124028639
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124028639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Actin_micro
Motif
Other DBs
NCBI-GeneID:
124028639
NCBI-ProteinID:
XP_046196608
LinkDB
All DBs
Position
LG03:complement(22933914..22952868)
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AA seq
1081 aa
AA seq
DB search
MAPRVQLEKAAWRWVESVRPEDIRREHIEIAYRICVPPCKRGACRRNCKGNPNCLVGIGE
HAWLGEINENSFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRTLYLC
QNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLQNVIQLQFCGQMSYVTVCNQCGRASPLPSRYYELELNIQG
HKNLTECVTEFLKEEKLDGDNCYFCESCQSKQNATRRIKLHSLPHVLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEGKEDEKCVYELSAVLIHRGVSAYSGHYIAHVRDARTS
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKCHGEE
DTDPMETNVDVPGFLQRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELYELLPA
EDGQQYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAAELLFD
RYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLVKGPPKSDEGYWVGKTSLR
SWRQLALEQLDEDEEETKHIDGKTNGEGPEITATKEYGPENQDEDEEEMKTFNEDILCRH
GGLSILESERRLVTEEVWSKLRVYFPRAPQFTQLQEPCQQCLRLEREGKENEALNRMMAS
EQKSSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRKFIRRPTKTTPVSSVGNSLL
LCPHGGFMFTHDSMLMGDAQHIALLWPGEWEVISRHFLVDQPISICRISQATPNGSSVEY
TTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRLMEAAPEVNVSGSEAEDERE
EPVTKVDGERDPDFSQIEDGAKRQRLSDCTIGAAASPAPMASGGKSGIRRSTRRRKLRGE
KALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESVICLKA
DEPIADYAALDDVYQVCMPEEGFKGHAPLDHDSGLPGLMTPGCPQSTWSFCCSSLNCSAC
G
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtcgagtcggtgagaccg
gaggacatacgccgggaacatattgagatagcttaccgaatctgtgtaccgccgtgcaag
aggggagcatgcaggaggaattgtaaagggaacccaaattgtcttgtcggtattggggaa
catgcctggttgggagagataaacgaaaacagcttccacaacattgatgatccaaattca
gagcgccgggacaagaacacgtttgtgggtctgacgaacctgggcgccacgtgttacgtc
aacaccttccttcaggtgtggttccacaacctggagctgcgcaggaccctgtacctgtgt
cagaatgcccgggcagaggagcacaacatggactcagactatgagcctcgcagcatatgt
gaacacctgcagtacctgtttgcacttcttcagaacagcaacagaaggtacattgacccc
tcggggctggtcaaggcgctagggctggacacaggacaacagcaggacgctcaagagttc
tccaaactcttcctttcgctattggaggacacattatccaaacagaagaacccaaacctg
cagaatgtcattcagctgcaattctgtggacagatgtcttacgtcactgtgtgtaaccag
tgtggccgcgcttctccactgccgtcccgatactacgaactggagctcaacatccagggc
cacaagaaccttacagaatgtgtcacagagtttctcaaggaggagaagctggacggtgac
aactgctacttctgtgagagctgccagagcaaacagaacgccactcgacgcatcaaactg
cacagcctcccacatgtactaaacctgcagctcatgcgttttgtcttcgacagacaaacg
ggtcacaagaagaagctcaacaccttcatcagttttccagagcagctggacatgggcccg
ttcctggagggaaaagaagatgagaagtgtgtgtacgagctgagtgcggtcctgatccac
cgcggggtcagcgcttactcgggtcactacattgcacacgtgcgagacgcccgcaccagc
gactggtacaagttcaacgacgaggagattgagaagatggagggcaaaaagctacaactg
ggcatcgaggaggacatcgccgagacggtgaagtcccagacccgtaagcccaagtgcagt
aaaggataccactgctccaggaacgcctacatgctggtgtataagtgccatggagaggag
gacactgaccccatggagaccaacgttgacgtgccaggctttctacagaggctggtggac
cgagacaacaggaagtttgaggagtggtgcctggagatggccgacatgcgcaagcagagt
gtcgacaagggcaaggccaagcacgaagaggtgaaggaactctacgagcttttacctgcg
gaagacggccagcagtatgagtttgtgcctctggagtggttgaagaaatggctggacgac
tcgacggtcactaaagaaatcgacaacggcaacttcctctgttctcatggtaaacttcac
ccagacaaggtgggggaggccaagaggatctctgttaaagcagcagagcttctctttgac
agatacggcggaggaccaagactagatgggtcaactctctgtgaggaatgtgtgggccag
agatgcagggtgctgcggctaaagaaccagctggccgaggactacaaagaagtcaccaac
cttgtcaagggcccgcccaaaagtgatgaggggtactgggtgggcaagacgtctcttcgg
agctggagacagctggccttggagcagctggatgaggacgaggaggagaccaaacacatc
gacggcaaaaccaacggagagggaccagagatcactgctactaaagagtacggcccagag
aaccaggatgaagacgaggaggagatgaagaccttcaacgaggacatcctctgtcggcat
ggtggcctgagtatcctggagagcgagaggcggctggtgacggaggaggtgtggtccaaa
ctgagggtgtatttccccagagccccccagttcacccagctacaggagccctgtcagcag
tgcctgaggctggagcgtgaggggaaggagaatgaggctctgaacaggatgatggcatca
gaacagaagagctccctcctcaacctgttccaggagaagaacagacccacactcaccaag
tggccgcaggagacggacattctctacatagttcctctgttttttgtggacgagtggaga
aagttcatcaggaggcccactaagaccaccccagtgtctagcgtggggaacagtttgcta
ctttgtccccatggaggcttcatgttcacccatgactccatgttaatgggagacgcccaa
catatagctcttctctggcccggtgaatgggaggtgatcagcagacacttcctggttgat
cagccaatctccatctgccggatcagtcaggccacacccaacggctccagtgtggagtac
accacccagcctgagctttgtagggactgcagagaaggcttcatcttccagcaacagagg
gacatgagagagtacgcacaagccacagtctacgtccgcaaggtcatagacgacaagagg
ctaatggaggcagctcctgaggtgaatgtgagtgggtcggaggcagaggatgagagggag
gagcctgttactaaggtggacggagagcgagaccctgactttagccagatagaggacggg
gcgaagcgtcagaggctgagtgactgcaccatcggtgctgccgcaagtccggcccccatg
gccagtggcggaaaatcgggtatcaggaggagcacaaggcgcaggaagctccggggagag
aaagcactcatcgtctcagccaatcagacactcaaggagctcaaaatacaaatcatgcat
gccttctctgtggccccgtttgatcagaacctgtcgatcgacggccggtgtctaacggac
gactctgccaccctcggcagcctaggagtcatcccagagagcgtcatctgtctgaaggct
gatgaacccatagcagattatgcagcattggatgacgtttatcaggtctgtatgcctgaa
gaaggatttaaaggacatgcgcccctggatcatgattcaggactacctggcctgatgact
ccaggctgtccccagtccacctggtccttctgctgctccagtttaaactgttctgcctgc
ggctag
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