KEGG   Oncorhynchus gorbuscha (pink salmon): 124028727
Entry
124028727         CDS       T07892                                 
Name
(RefSeq) cullin-4B-like
  KO
K10609  cullin 4
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420  Nucleotide excision repair
ogo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124028727
  09124 Replication and repair
   03420 Nucleotide excision repair
    124028727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogo04121]
    124028727
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124028727
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124028727
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     124028727
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124028727
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124028727
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124028727
SSDB
Motif
Pfam: Cullin HAT_PRP39_N
Other DBs
NCBI-GeneID: 124028727
NCBI-ProteinID: XP_046196660
LinkDB
Position
Unknown
AA seq 683 aa
MAEDIRQDKKANFSALTEHNNNGVTKISGLASNKTGASKKLVIKNFKDRPKLADNYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFR
EESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRNHI
VSDGAVQKRTVDGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFEERFLMETDRL
YAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPLISNVEKQLLGEHMTAI
LQKGLSILLDGNRVMELALLYQLFSKVKGGLPTLLQHWRDYIKSFGGEIVGTPEKDKDMV
QDLLDFKDKMDNVAQGCFNRNESFINAMKEAFEAFINNRPNKPAELIAKYVDCKLRAGNK
EATEEEMERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDVMIQFKQYTQNQSEPSQLELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMF
NEGEEFSVEEIKSATGIEEGELRRTLQSLACGKARVLNKSPRGKDIEDGDRFNFNNDFRH
KLFRIKINQIQMKETVEEQVSTT
NT seq 2048 nt   +upstreamnt  +downstreamnt
atggcagaagacatacgacaggacaagaaagccaacttctctgctctgacggagcacaac
aacaacggagtgacaaagatttctggcctggcctccaacaaaactggcgcctccaaaaaa
ttagtcattaaaaatttcaaagacaggccaaagctagcggacaactacactgaggacacc
tggctgaagctgagggatgcggtaggagccatccagaacagcacctccatcaagtacaac
cttgaggaactctaccaggcggtggagaacctgtgttcctataaagtctcccccacactg
tacaagcagctccgtcaggtctgtgaggaccatgtccaggcccagatacatcagttcaga
gaagagtccctggacagcctgtctttcctgaagaggatgaaccgatgttggcaggaccac
tgcagacagacgatcatgatccggagtatctttctgttcctggatcgtacctacgtgctc
cagaactccctgctcccctccatctgggataccgggctggaactcttccggaaccacatc
gtgagtgacggggctgtccagaagcgtacggtcgacgggatcctggaacagatcgaacgc
gaacgcaacggagagacagtggaccgcagccttctccgcagcctactgggcatgctctca
gacctgcaggtgtataaagagtcgtttgaggagcgttttttgatggagactgacagactg
tacgctgcagagggacagagactgatgcaggaacgagacgtgccggagtacctgcatcat
gtggctcgtcggttggaagaagagaacgatcgtgtcatcagctacctcgaccagagcact
cagaagccacttatctctaatgtggagaagcagctgcttggagaacacatgacggccatc
ttacagaaaggtctcagtattctgttagacggtaaccgggtgatggagctggctctgctc
taccagctcttcagtaaggtgaagggaggactccccactctgctgcagcactggagagac
tacatcaagagttttggtggtgagattgtgggcaccccagagaaggataaggacatggtt
caagacctgttggactttaaggataagatggacaacgtggcccagggctgtttcaacaga
aacgagagcttcatcaacgctatgaaggaggcctttgaagctttcatcaacaacagaccc
aacaaacctgctgaactcatcgcgaagtacgtggactgtaagttgagggcgggcaacaag
gaagctaccgaggaggagatggagagaattctagacaaaatcatgatcatcttccgcttc
atccacgggaaggatgtgttcgaggccttttataagaaggacctggccaaacgcctgctg
gtggggaagagtgcctccgtggacgctgagaagtccatgctgtccaaactcaaacacgag
tgtggagcggccttcaccagtaagctggaggggatgtttaaggacatggagctctccaaa
gacgttatgatccagttcaagcagtacacccagaaccagagtgagcccagccagctggag
ctgacagtcaacatcctcaccatgggctactggccctcctacactcctatggaggtccac
ctgccccctgagatggtgaagctccaggaggtattcaagctgttctatctggggaaacac
agtggcaggaagctccagtggcagcccaccctgggccacgctgttctgaagactgagttt
aaagagggtaagaaggagctgcaggtgtctctgttccagacgttggtgctattgatgttc
aacgagggggaggagttcagcgtggaggagatcaaatcagccactggcatagaggagggt
gagttgaggcgtaccctgcagtctctggcctgtgggaaggcgcgcgtcctcaataagagt
ccccgggggaaggacatagaagacggagaccgcttcaacttcaacaacgacttcagacac
aaactgttccgcatcaagatcaaccagattcagatgaaggaaacggtagaggagcaggtg
agcaccac

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