Oncorhynchus gorbuscha (pink salmon): 124029006
Help
Entry
124029006 CDS
T07892
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124029006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124029006
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124029006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
124029006
NCBI-ProteinID:
XP_046196836
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
METFEEKPWRNQVTGHWGRGHWGGVTGGGVTGGGVTVGTLEEKPWRKPGTGYCGRGYCGR
GYCGAGLLWAGVAVGGGCCGAGSLWCGVAVVRGRCGAGSLWCGVAVVRGRCGIFEEKPWR
KPGADLSDYFNYGFNEDTWKGYCDKQKRLRMGLEVVNISSTTSKITVQQGRTGNEKEVSL
PIHTSKPDFPTPASIYKTSMNMNTTRISPPQWTAPPVQDMSYYTKTSGTIDVIGGGTATI
SRVEGRRRHNLEGNNIQVISEHSSSDAEQNSNKMPPFFPPGPLPQTSLLPHSFPLLPTSA
RLPPLIPPTK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttcgaggagaaaccctggagaaaccaggtaacgggtcactgggggcggggt
cactggggcggggtcactgggggcggggtcactgggggcggggttactgtggggacatta
gaggagaaaccctggaggaaaccaggtacgggttactgtgggcggggttactgtgggcgg
ggttactgtggtgcggggttgctgtgggcgggggttgctgtgggcgggggttgctgtggt
gcggggtcgctgtggtgcggggtcgctgtggtgcggggtcgctgtggtgcggggtcgctg
tggtgcggggtcgctgtggtgcggggtcgctgtgggatattcgaggagaaaccctggagg
aaaccaggtgctgacctgtctgactactttaactatgggttcaacgaggacacgtggaag
ggctactgtgacaaacagaagaggctgaggatgggcctggaggtcgtcaacatctcctcc
accaccagcaaaatcactgttcagcagggcaggacggggaatgagaaggaagtgagttta
cccatccacacgtccaaacctgacttccccactccagccagcatctacaagacatccatg
aatatgaacactaccaggatctcccccccacagtggactgctccccccgtccaggacatg
tcctactatacgaagaccagtggtacgatcgacgtgattggaggagggaccgctaccatc
agcagagtggagggacgacgaagacacaacctggagggaaacaacatccaggtgatttcg
gaacactcgtcgtcggacgctgagcaaaactccaacaagatgccccccttcttccccccc
ggccccctcccccaaacatccctcctcccccattccttccccctcctcccaacgtcagcc
aggctcccccctctcatcccccccaccaagtaa
DBGET
integrated database retrieval system
