Oncorhynchus gorbuscha (pink salmon): 124029578
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Entry
124029578 CDS
T07892
Symbol
slc6a22.2
Name
(RefSeq) solute carrier family 6 member 22, tandem duplicate 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124029578 (slc6a22.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124029578 (slc6a22.2)
Transporters [BR:
ogo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124029578 (slc6a22.2)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124029578
NCBI-ProteinID:
XP_046197198
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Position
LG03:complement(26788033..26813830)
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AA seq
637 aa
AA seq
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MSGHCNRLSKAEMEVKLKLMSSGAKTNVEHPEPKPQDRGKWGSKTEFLLAAAGHIVGLGN
VWRFPYLCYKNGGGVFFVPYILFLFTCGIPLFFLETSLGQYTSQGGITCWRKICPLFEGL
GYGSQVVVLYTGVYYIIILAWAFLYLFYSFSLELPWASCKNSWNTDNCFEPGQNSTISDH
SHGNTTSSVIEFWERRILGLSEGIEEIGSVRWDLALCLLLSWIICYFCVWKGVKSTGKVV
YFTATFPYVMLLVLLVRGLTLPGAIDGIKFYLYPDPARLTDPQVWMDAGSQIFYSYGVCT
GVLTSLGSYNKYNNNCYRDCVYLCLLNSVTSFVAGFAIFSVLGFMAYEQGIDISMVAESG
PGLVFIAYPRAVAMMPVPQLWAIFFYIMILLLGLDSQFVYHEAVVTAISDMYPSFFHVGH
LRKKLLLLGISVCSFLIGLLMVTEGGLYVFQLFDYYACSGMTLLVFASLQAVCVGWCYGA
ERLYDNIEDMIGYRPWPFMKYCWMYITPVICIGTLVFSLVKYTPLKFNNTYEYPWWGYAI
GGFFTLSSTLLVPFWMLYKMSVTAGSLRQRMKVLTSPAEDLPKPMSQKVALNPSEVFQMF
TELCTLRTPNQTPTVASSQLSAAPVQTVSINTLNLET
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacactgtaatagactttcaaaggctgaaatggaggtgaagctgaagttgatg
agttcaggagccaagacgaacgtggaacaccctgaacccaagccccaggacaggggaaag
tggggcagcaaaacagagttcttattggcagcagctggacacattgtcggtctgggaaat
gtatggaggttcccatacctgtgctataaaaatggaggaggagttttctttgtcccctat
attttgttcctgttcacctgcggtattcccctcttcttcctggagacatcattgggccag
tacactagtcagggtggaatcacttgctggaggaaaatctgtccactctttgaaggcctg
ggctatggaagccaagtggtggttttgtacactggagtgtattacatcatcattctggct
tgggcgttcctatacctcttctattccttcagtttagaactcccatgggccagttgtaaa
aacagttggaacacagacaactgctttgagcctggccaaaacagcacaatttctgaccat
tctcatgggaacactacatcctcagtcatagaattttgggagagaagaatattgggcttg
tctgagggaattgaagagattgggagtgttcgctgggacctagctctgtgtcttctgctg
tcctggattatctgttatttctgtgtctggaaaggagtgaagtctactgggaaggtggtc
tatttcactgccaccttcccctatgtgatgctgttggtgttgctagttcgtggactcaca
ctgccaggggccatagatggtatcaagttctacctctacccagatccagcccgcctcact
gacccacaggtatggatggatgctggaagccagatattttactcctatggagtttgtaca
ggggttttgacatctttaggcagctacaacaagtacaataacaactgctacagggactgt
gtgtatctttgtctactaaacagtgtgactagctttgtggctggttttgccattttctct
gtactgggcttcatggcttatgaacagggcatagacatctcaatggtggctgaatcaggt
cctggcctggtgttcatcgcctaccctcgtgctgtggccatgatgccagtaccccaactc
tgggccatcttcttctacatcatgatcctcctactggggttagacagtcagtttgtatat
cacgaggccgtggtcacagcgatctcagacatgtacccctctttcttccacgtgggccat
ctgcggaaaaaacttctcctgcttggcatcagtgtgtgcagcttcctgattggcctgcta
atggtcacagagggtggcctgtatgtgtttcagctgtttgattactatgcctgcagtggg
atgacactcctggtctttgctagtctccaggccgtctgtgttgggtggtgttatggtgcg
gaacggctgtatgataatattgaggacatgattggctatcgtccttggccattcatgaag
tactgttggatgtacatcacacctgtcatatgcataggtacgcttgtcttctccctggtc
aagtatacccccctcaagttcaacaacacttatgagtacccctggtggggctacgccatt
ggtggattcttcactctctcctcgacgttactggtacctttctggatgctgtacaagatg
agtgtcaccgctggttcactgcggcagagaatgaaagtgttaaccagtccagcagaggat
ctacccaaacccatgtcacagaaggtggccctcaacccctcagaagtgtttcagatgttc
acagaactttgcacattacggacaccaaaccaaacccctacagtcgccagctcccagctg
agtgcagcaccagtacagacagtgtccataaacaccttgaacttggaaacttaa
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