Oncorhynchus gorbuscha (pink salmon): 124029596
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Entry
124029596 CDS
T07892
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124029596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124029596
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124029596
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
124029596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
SPK
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
124029596
NCBI-ProteinID:
XP_046197212
LinkDB
All DBs
Position
Unknown
AA seq
222 aa
AA seq
DB search
SLSLCVCIHLSLPLCVYTSLSPPVCVYISLSLCGVCAGDRLCSTEDCMPGTGVYLRHGYI
YSSLAGYVLRKNEGEELPVISVVRETEAQLLPDVGAIVTCKVTSINPRFAKVHILYVGST
PLKDRFRGTIRKEDVRATEKDRVETYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGV
VVAHSEAGAQMVPISWCEMQCPRTHAKEFRKVARVQPEYLQA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
tctctctccctctgtgtgtgtatacatctctctctccctctgtgtgtgtatacatctctc
tctccccctgtgtgtgtatacatctctctctccctgtgtggtgtgtgtgcaggtgatagg
ctatgcagcacagaagactgtatgcccggtactggggtgtacctacgacacggctacatc
tactcctcgctagcaggctacgtactcaggaagaacgaaggagaggagctaccagtcatc
tcggtggtgagagaaaccgaggctcagctactaccagatgtaggagccatagtgacctgt
aaggtgaccagtatcaaccccaggtttgctaaggttcacatcctctacgttggttccaca
ccactgaaggaccgttttagaggaaccatcaggaaagaagatgtacgagcaacagaaaaa
gacagggtggagacgtataaaagcttccgtcctggagacatcgtcctggctaaagtcatc
tccctgggagacgtccagtccaactacctgttgaccacagcagagaacgagctgggggtg
gtggtagcccacagtgaagcaggggcccagatggtgcctatcagctggtgtgagatgcag
tgcccaaggacacacgccaaagagttccgcaaggtggccagggtgcaacctgagtacctg
caggcctga
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integrated database retrieval system
