Oncorhynchus gorbuscha (pink salmon): 124031235
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Entry
124031235 CDS
T07892
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124031235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124031235
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124031235
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
IQ
Neur_chan_memb
GPHH
Dynamin-like_hel_bact
HB_ELP1
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
124031235
NCBI-ProteinID:
XP_046198223
LinkDB
All DBs
Position
LG03:complement(32445023..32612638)
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AA seq
1992 aa
AA seq
DB search
MAAPGLAPPGPDSFKLFTPESLLTIEERQFQEKIKKKPKPKSDSSHREEEEEEPMPNGDL
EAGKSLPFIYGDIPNGLVAVPLEDLDPYYMNEKTFIVLNKGKTIFRFHATDSLYVISPFS
LFRRIAIKILIHSVFSMIIMSTILTNCVFMTFSDPPEWNKIVEYTFTGIYTFESLTKIVA
RGFCIDGFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALVQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINSTENYLANGSKG
FDWTEYIMNSTNFYILPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWA
FLTLFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQ
ATIEEAEQKEAEFKAMLEQIKNQQEDAQAAAMATSAGTVSVGDAVEGGDATEGGGQLSRS
SSEASKLSSKSAKERRNRKKKSRQKEEEKKEKGEKGEKVDHEKHVKSESDDGSKRSIFRF
PGSRLGRKTSIMNQSLLSIPGSPFMSRHNSRSSIFSFNKGRPPKDVGSENEFADDEHSTV
EESEDRRGSLFIPYRRSSYSGYSQGSSRLISPLAPHTGGKRNSTVDCNGVVSLIAHQPGG
RLLPEVKIDKAATDDSTTEVEGKKKHSGSLMVSVDQLGRNKDRANSVMSVATHTHSHTLL
EELEDSQRACPSWWYKFANMFCVWDCFPIWLKIKHVLNLIVMDPFVDLAVTICIVLNTLF
MAMEHYPMTPRFEETLSVGNLVFTGIFAGEMFAKLAAMDPYYYFQEGWNCFDSFIVTLSL
VELVLADIEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIHSSVGALGNLTLVLALIVFIF
AVVGMQLFGKNYKDCVCKIAISCKLPRWHMNDFFHSFLMVFRVLCGEWIESMWDCMEVAG
QNMCMIVFLMVMVIGNLVVLNLFLALLLSSFSADNLAPSDDDGEQNNLQIAVGRIKTGIA
WAKVFVAEVMKKEEEEAEDEQKPLDEFDEKLNCIANQKGIDINRELDYINGTTSGIGSSV
GKYMIDEDHMSFIHNPNLTVCVPIAVGESDFDNLNTEDFSSESDAENSKDLDDTSSSEGS
TIDIKLDVEEVVVVEVVEEFLDPDACWTDECVAKYTFLYLPIDHGWGKHWWFLRKTSYLI
VEHNWFETVIIFMILLSSGALAFEDVYINKRKTIKIILEYADSVFTYIFILEMVLKWVAY
GWVKYFTNAWCWLDFFIVDVSIITLIANAMGYSDLGPVKSLRTLRALRPLRALSRFEGMR
VVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEENFKPDVVNNKT
ECFALINANYSEVRWKNVKINFDNVAAGYLALLQVATFKGWMDIMYAAIDSRKVEDQPIY
EDNIYMYIYFVAFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYHTAMKK
LGSKKPQKPIPRPLNNFQGLVFDFVTQQVFDISIMMLICLNMVTMMVETDDQSEDTDTIL
YWVNFVFIVAFTTEFVLKLFALRHYYFTIGWNIFDVVVVILSIVGMFLADIIEKYFVSPT
LFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFG
YVKHGAGIDDMYNFETFGNSMICLFMITTSAGWDGLLLPILNYPPDCDPQLENPGAPNTG
DCGNPSVGIFFFVMYIIVSFLIVVNMYIAIILENFGVATEESADPLSEDDFTTFYEIWEK
FDPDASQFITYGKLGDFADYLEHPLRVPKPNTIELISMDLPMVSGDRIHCLDILFAFTKR
VLGDTGELDMLRDQMEQRFIAANPSKVSYEPITTTLRRKQEDVSAKIIQQAYRNYLARRG
FKCKRRPANNNNVKNGGTNPEKEKKEGTPSTASLPSYDSVTKPDKEKQDDNEGKAGRKEK
GRNQKSVRESKC
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcccggtctcgcacccccaggacctgacagcttcaagctgttcacccccgag
tcgctccttactatcgaggagcgccaattccaggagaagatcaagaaaaagcccaagccc
aagtctgacagcagtcaccgcgaggaagaagaggaagaacccatgcccaacggtgatctg
gaggcggggaagtccctccctttcatctacggggacatccctaatgggctggtggcggta
ccactggaggacttggacccttattatatgaatgagaaaacgtttatagtcctaaacaaa
gggaaaaccatcttccgcttccacgccacggactccttgtacgtcatcagcccttttagt
ctctttaggcgaatagcaattaagattttgatacactcggtattcagtatgatcatcatg
agcaccattttgaccaactgtgttttcatgacatttagtgatcctccagaatggaacaag
atagtagagtataccttcacaggtatctacaccttcgaatcacttaccaagattgtggcg
cgaggcttttgtatagacgggttcacttttctacgagatccatggaactggctggacttc
atggtgatctctatggcatatgtaacagaatttgtggacctggggaatgtctcggcgctg
agaacgttcagagttctccgagcattgaaaactatttctgtgattccaggactcaagacc
atcgtcggtgctctagttcaatccgtcaagaaattgtcagacgttatgatcctcacggtc
ttctgtctcagtgtcttcgctttgattggactacagctcttcatgggcaacctgcggcag
aaatgtgtcatctggccaatcaactccactgagaactacctggccaatggcagcaagggc
ttcgactggaccgaatacatcatgaacagcaccaacttctacatccttcccgggcagctg
gatgctctgctgtgtggaaacagctcagactcagggcggtgccctgagggctacacgtgt
atgaaggccgggagaaacccaaactacggctacaccagctttgatagcttcggctgggcc
ttcctcactctcttccgcctcatgacccaagacttttgggagaacctctacatgttgact
ctgcgagcggcagggaaaacctacatgatcttctttgtgttggtgattttcgttggatcc
ttctacctggtcaatctgatcctggctgtggtggccatggcctatgaggagcagaaccag
gcgacgatagaggaagctgagcagaaagaggccgagttcaaagccatgctggagcagatc
aagaaccagcaggaggatgcacaggctgctgccatggcgacctcggcgggcacggtttcg
gtgggcgacgcggtagaggggggagacgcaacggagggcggtgggcaattatcacgcagc
tcctccgaggcgtccaagctcagctccaagagcgcgaaggaacgacgcaaccgcaagaag
aagtcacgtcagaaagaggaggagaagaaggagaagggagagaagggcgagaaggtcgac
cacgagaagcatgttaagtcagagtcggacgacggcagcaaaaggagcatcttccgtttc
ccgggcagccggcttggacgcaaaacgtccatcatgaaccagtctctcctctccatcccg
ggctctccattcatgtcgcggcacaacagccgtagcagcatcttcagcttcaacaagggc
cgccctccaaaggacgtgggctcagagaacgagtttgccgacgatgagcacagcacggtg
gaggagagcgaggaccgccggggctccctgttcatcccctaccgccgtagcagctacagc
ggatacagccagggctcatcgcgtctcatcagcccactggcgccccacaccggagggaag
aggaacagcacggtggactgcaacggcgtggtgtcgctcatcgctcaccagccaggcgga
cgccttctgcctgaggtgaaaatagataaggcagccactgacgacagtaccacagaggtg
gaggggaagaagaaacactcaggctccctgatggtgtctgtggaccagcttggccgcaac
aaggaccgcgccaacagtgtgatgagcgtggccacacacacacactcgcacactctactg
gaggagctagaggattctcagagggcgtgcccatcatggtggtataagtttgccaacatg
ttctgtgtgtgggactgctttcctatctggttgaagatcaagcatgtgctcaacctgatc
gttatggacccctttgtggatctggctgtcaccatctgtattgtcctcaacaccctcttc
atggccatggaacactaccccatgacccctcgctttgaggagacgctgtcagtgggaaat
ctggttttcactggtatctttgctggtgagatgtttgccaagctggctgccatggatcca
tactactacttccaggagggctggaattgttttgacagcttcattgtgaccctcagttta
gtcgagctggtattggctgacattgagggtctgtctgtgctcaggtcattccgattgctg
agagtgttcaagctggccaagtcgtggcccacactcaacatgctgatcaaaatcattcac
tcttctgtgggagccctgggaaacttgaccttggtgctggcccttatcgtcttcatcttc
gccgtggttggcatgcaactgtttggaaagaactacaaggactgtgtttgtaagatcgct
ataagctgtaagcttcctcgttggcacatgaacgacttctttcactcatttctcatggtg
tttcgagttctgtgtggggagtggatcgagtccatgtgggactgcatggaggtggccggc
cagaacatgtgcatgatcgtcttcttgatggtcatggtcataggcaacttggtggtgttg
aacctgttccttgccttgttgctgagctcgttcagcgcagacaacctggcaccctcggac
gatgacggagaacagaacaatttgcaaatagctgtcggtcgaataaagacggggattgcc
tgggccaaggtctttgtagccgaggttatgaagaaggaggaggaagaagcagaggacgaa
cagaagcctcttgatgagtttgacgagaagcttaactgcattgcaaaccagaagggcata
gacatcaaccgtgagttggactacatcaacggcactaccagcggcatcggcagcagcgtg
ggcaagtacatgatcgacgaggaccacatgtccttcatccacaatcccaacctaaccgtg
tgcgttcccattgcggtcggggagtcagacttcgataacctcaacactgaggacttcagc
agcgagtcagacgcggagaacagcaaagaccttgatgacaccagctcttcggagggcagc
accatagacatcaagcttgacgtggaggaggtggtggtggtggaggttgtggaagagttc
ctggacccagacgcctgctggacagatgaatgtgttgccaagtatacgtttttgtacttg
cccatcgaccatggctgggggaagcactggtggttcctgaggaagacaagttacctgatc
gtggagcacaactggtttgagaccgtcatcatcttcatgatcctgctcagtagcggggcg
ttggcctttgaggatgtgtacataaataagaggaagaccatcaagattatcctggagtac
gccgacagcgtgttcacctatatcttcatcctggagatggtgctcaaatgggtggcctat
ggttgggtcaaatacttcaccaacgcctggtgttggctggacttcttcattgtggatgtg
tctataatcactcttatagctaatgcgatgggctactccgatctagggcccgttaaatca
ctacggacattgagggccttgaggccccttagggccctgtctcgctttgaagggatgagg
gtggtggtgaatgccttggtgggagccatcccctccatcatgaacgtgctgctggtgtgc
ctcatcttctggctcatcttcagtatcatgggggtcaacctatttgcagggaagtattac
tactgcttcaacgagacctcagaggaaaactttaaacccgacgtcgtcaacaacaagact
gagtgctttgcactaatcaacgcaaattacagtgaggtcaggtggaagaatgtcaagatt
aactttgacaatgtggctgcaggatacctggcacttctacaagtggccacgtttaaaggc
tggatggacataatgtatgcggccattgattctcggaaggtggaggaccagccgatctat
gaagacaacatctacatgtatatctactttgttgccttcatcatctttggctctttcttt
accctcaatctcttcattggtgtcatcattgacaactttaaccagcaaaagaaaaagttt
ggaggtcaggatatattcatgacagaagagcagaagaaataccacactgccatgaaaaaa
cttggctcaaaaaaaccacaaaaacctattccaagaccactgaataactttcagggcctg
gtatttgacttcgtaacgcagcaggtctttgatatatctattatgatgttgatctgcctc
aacatggtgaccatgatggtggagacggacgatcagtcagaagatactgacactattctc
tactgggtcaacttcgtcttcatcgttgcctttactaccgagtttgtgttaaagctcttt
gcccttcgccactactacttcaccattggatggaacatctttgacgtggtcgtggtcatt
ctctcaattgttggcatgttcctcgcagacatcattgagaagtactttgtctctccaacc
ctcttcagggtgatccgactggctcgaatcggcagaatcctgcgtctgatcaaaggggcc
aagggcattcggactctactgtttgccctgatgatgtcccttcctgctctgttcaacatc
gggttgttactcttcctggttatgttcatcttctctatctttggcatgtctaactttggc
tatgtcaaacatggggcaggaatcgacgacatgtacaactttgagacatttggcaacagc
atgatctgcctgtttatgatcactacgtctgccggctgggacggtttgttgttacccatt
ctcaactaccccccagactgtgacccacaactggagaacccaggtgcaccgaatacaggt
gactgcggcaacccctcggttgggattttcttcttcgtcatgtacattatcgtctccttc
ctaattgtggtcaacatgtacattgccattatccttgagaacttcggcgttgcgactgaa
gagagtgccgacccgctcagcgaagacgacttcacgaccttctacgaaatatgggagaag
ttcgacccagacgcctcgcagttcatcacctatggcaagcttggtgactttgcagactac
ctagagcacccgctccgtgttccaaagcccaacactatagagctgatctccatggacttg
cccatggtgagcggggaccggatccactgcctcgacattctgtttgcattcaccaagcgg
gtactaggcgataccggagagctggacatgctgagggatcaaatggaacagcgctttatt
gcggcgaacccgtccaaagtgtcttatgagcccattaccactactctgaggcgcaagcag
gaggacgtgtcggccaaaatcatccagcaggcctatcgaaactacctggctagacgtggc
ttcaaatgcaagcgcagaccggccaataacaataatgtaaagaatggtgggacgaatccg
gaaaaggaaaagaaggagggcacgccctccactgcctctctcccctcctatgacagtgta
accaaacctgacaaggaaaaacaggatgataatgaaggaaaggcagggaggaaggagaag
ggcagaaaccaaaaatccgtcagggaatctaagtgttag
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integrated database retrieval system
