Oncorhynchus gorbuscha (pink salmon): 124031236
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Entry
124031236 CDS
T07892
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124031236
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
124031236
NCBI-ProteinID:
XP_046198268
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All DBs
Position
LG01:113789019..113811910
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AA seq
637 aa
AA seq
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MDSPMCLVKNADGELCVEPEAIDYLMGLKQKVVVVSVVGLYRTGKSYLMNKLAQKRSGFA
LGATIQSKTKGIWMWCVPHPEKTDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNDAVEKLQYVNELTEKIKVKSSTVDEEEGEGTQFMQFFPNFVWTVRDFTLQ
LEIDGREITPDDYLENSLQLKKGTSKKINDYNLPRECIRNFFPSRKCFVFPSPTTPDNMH
RLDSMDEAELSERFREVADTFCRFIFQECRVKTVIGGHTLTGEMLGHLVNTYVETIAKGN
VPCLENAVLAMAKIENQVAVDEGLVVYQKGMEDVKVLFPVDINQLSENHLRSETQATKAF
MKRSFKDKDGEFLKVLAEAISNHSADLFKQNKDASEKKCKALLEKLSALMDQGMKEGMYT
TPGGYELYCNHHDNIVAQYRAEPNKGVRAEEVLEQFLKDKSAESNFIQQADKKLTDNEKQ
IQAEKKKTAELEQEKAAFRKQQAEMERRIEKNRASQEKYLKEMKEKMEEERKQQQQEFIR
TLERRMQEQKDLLEKGHKEKAELMRQDIEEIKKKNQLERDAYIKNTQNQKALLDDYKKQA
VGQNKQMEMLMRELNNRSQTPVQVVERLVPQEACIVM
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggactccccaatgtgcctcgttaaaaatgctgacggagagctttgcgtagaaccagag
gccatcgactacctgatgggactgaaacagaaagtcgtagttgtgtctgtggtcgggctg
tatcgcaccggaaagtcctacctcatgaacaagctggctcagaagagaagtggttttgcc
cttggagccaccatccagtctaagactaagggcatctggatgtggtgtgtccctcatcct
gaaaaaacagaccacaccctggtgctgctggatacagagggactgggggacgtggagaag
ggggattctaagaacgatgcctggatcttctcgctggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcgacaatgatgctgtggagaagcttcaatatgtgaac
gagctgacagagaagatcaaggtgaagtcttccactgtcgatgaggaggaaggagagggc
acccagtttatgcagttctttcctaattttgtgtggaccgtcagagatttcactctacag
ctcgagatcgacggcagagaaatcactccagacgattatctggagaattccctgcaactc
aagaaaggtactagtaaaaagatcaatgactacaacctcccgcgagagtgcatccggaac
ttcttcccctcacgcaagtgttttgtgttcccctcccctacaactcctgacaacatgcac
cgactggactccatggacgaggctgagctttctgaacgcttcagagaggtcgcagatact
ttctgccgctttattttccaggagtgccgtgtgaagactgttataggaggacacacattg
actggagagatgttggggcacttggtgaacacctatgtggagaccattgccaaaggcaat
gtgccctgtctggagaatgctgtgttggccatggctaaaattgagaaccaggttgctgtg
gatgagggcctggtggtgtaccagaagggaatggaggatgtgaaggtcttattcccagtg
gacatcaatcagctgtcagagaaccatcttcgctcagagacccaggccacaaaggcattc
atgaaacgatccttcaaagacaaagatggggaattcttgaaagttctggcggaggccatt
agcaaccactccgccgaccttttcaaacagaacaaggatgcctcagagaagaagtgcaag
gcccttctggaaaagctgtctgctctgatggatcaggggatgaaggaggggatgtacacc
acaccaggaggctatgagctttactgcaatcaccatgacaacatagtggcacagtaccgg
gccgagcccaacaaaggagtcagggctgaggaggttctggagcagttcctgaaggacaag
agtgcagagtccaacttcatccagcaagctgacaaaaaactgactgacaatgagaaacaa
atccaagctgagaagaagaaaacagctgagttggagcaggagaaggcagcattcaggaag
caacaggcagagatggagcgcagaattgagaaaaatcgcgctagccaggagaagtacttg
aaggagatgaaagagaagatggaggaggagaggaagcaacagcagcaggagttcataagg
accctggaacgcaggatgcaggagcagaaggatctcctggagaagggccataaggagaag
gctgagctaatgagacaagacatcgaggagataaagaagaagaatcaattggaaagggac
gcctatatcaagaatacacagaatcagaaggctctgctggatgactacaagaagcaggct
gtgggacagaataaacagatggaaatgttaatgagggagctcaacaatagatcacagacc
cctgtacaagttgttgaacgacttgttcctcaagaagcctgtatcgtaatgtga
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