Oncorhynchus gorbuscha (pink salmon): 124031240
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Entry
124031240 CDS
T07892
Name
(RefSeq) la-related protein 4-like isoform X1
KO
K18763
la-related protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124031240
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124031240
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
Motif
Other DBs
NCBI-GeneID:
124031240
NCBI-ProteinID:
XP_046198242
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Position
LG03:complement(32790788..32828884)
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AA seq
790 aa
AA seq
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MRVNSAVIMTLIKRCNRGICFRSLVTTKGAGLNPNAKVWQEIPVPQSQVPEDGTEGTHWL
ETTPTSADVTEGYSEAPPTEDKGYGTEYSDPSDSSARLPTEGVLNGMDPPELGYPLYNSV
TESAVEEQQPLSEESLRESLKKQLEFCFSRENLSKDLYLMSQMDSDHFVPIWTIASIEGI
KVLTTDMDLILEVLRASPMVQVDEMGEKVRPNHKRCIIILREVPETTPVEEVEALFKNEN
CPKVMSVEFAANNNWYITFQSDTDAQQAHIYLREDVKTFQGKPIMARIKAINTFFAKNGY
RSVPNSSVYSQQGQSQYNSTHLYMQQVFSPQQQYPLYPLVPPTWNPSPAPYFQTPLAPFP
NSGFVNGFSTAGNYKTGTSPLGLGRPPFNRNRVPLYSRKNVINAFRNHAKSQPRPCDETP
PSVTPVSPLVDGLSGPSSALPPRAAGPPLGSTPEPGPVPPTLRDTLPLAAEGMPNGDLGI
AGRGRRGSYRGMRRKREDERITRPIPLSEIKVPQPKFDLATSNFPPLPGCVVSMQGEPVL
ETRMSDVVRGLKVTSDKPDVNKESVAPPASAQKEAVSAPSQVVPAHKPPTPLVVEPLVPS
VAHPVKKVEKPEPHVQKEMAPPPTPPSSLPTPSQPAAATKPTPTHSQSISTATPFPATTT
PAPESRKLSYAEMCKRPATQPPAPSTSPNPPTSPASQPLRELRVNKANEPATTSSSDGDR
PEKSERPGEGQPHLDPLGSYCGVNGPARSGGMGLKYRDQQRGASMSRRISPQGWARRSGK
EQNIPPRSPK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcaatagcgctgtaataatgacgttaatcaaacgttgcaatcggggaatatgc
tttcgttcattggtcaccacaaagggagcagggctaaaccccaatgccaaagtctggcag
gagatccctgtgccccagagccaagtcccagaggacggcacggagggcacccactggctg
gagactacccccacttctgctgatgtcactgagggctattcagaggctcccccaactgag
gataagggatacggcacggagtactcagacccgtcggacagtagtgcccgtttacccaca
gagggtgtactgaacggcatggatccccctgagctggggtaccccctctataactctgtg
actgagtcagcagtggaggaacagcagcccctctctgaagagagcctgagagagtctctg
aagaaacagctggagttttgcttctcaagagagaatctgtccaaggatctgtacctgatg
tcccagatggatagtgatcactttgtccccatctggaccatcgccagcattgagggcatc
aaggtcctcactaccgacatggacctcatcctggaggtactacgagcctcgcccatggtg
caagttgatgagatgggggaaaaggttcggcccaatcacaagcgctgcatcatcattctg
agggaggtgccagagaccacacctgtagaggaagtggaggccctctttaagaatgaaaac
tgtcccaaggtgatgagtgttgaatttgcggccaacaacaactggtatatcacattccag
tcggacactgatgcacagcaggcacacatatatctaagggaagatgtgaaaacgtttcag
ggaaaacccatcatggctcgtatcaaggccatcaacacattctttgcgaagaatggctac
cgtagtgtaccgaactccagtgtgtacagccagcagggccagtcccagtataactcaacg
cacctctacatgcagcaggtattcagcccccagcagcagtacccactctaccccctggtg
ccacccacctggaacccatcgcctgccccttacttccagaccccgctggccccgttcccc
aacagtggctttgtgaacggcttcagcaccgctgggaactacaagactggcaccagtccc
ttgggcctcggacgaccgcccttcaacagaaaccgtgtccccctctattctagaaagaat
gtaatcaatgccttcaggaaccacgcgaagagccagccccggccatgtgacgagacccct
ccctctgttacccccgtatcccccctggtggatggcctgtcgggcccctccagcgctctt
cctccccgggcggcagggcctcccctgggtagcacccccgagcctggccctgtgcccccc
accctcagggacaccctgccactggctgcagaggggatgcccaatggagacctgggcatt
gctggcaggggcaggagaggcagctacagagggatgcggaggaagagagaggacgagagg
atcacgaggcccatccctctgagtgagataaaggttccacagcccaagtttgacctggcg
acctccaacttccctccattgcctgggtgtgtggtcagcatgcagggagagcccgtgcta
gagactcgcatgtctgatgtggttcgaggcctcaaggtgaccagcgacaagcctgatgtg
aataaggagtctgtggcccctcctgctagtgcccaaaaggaggctgtgagtgcgcccagt
caggtcgtgccggcccacaaaccccccacccctctggttgtggagccccttgttccaagt
gttgctcatccggtgaagaaagtggagaagcctgagcctcatgtccaaaaagagatggct
ccaccccccacaccaccctcttctctgccaaccccctcacagcccgccgctgcaaccaaa
cctacgcccacccacagtcagtccatctccacggcaacaccatttcccgccactaccaca
cctgcaccggagtcaaggaaactgagctatgctgagatgtgcaagcggccagccacccag
cccccagcgccaagcacctccccaaaccctcccacctccccggccagccaacccctgcgt
gaactgcgggttaacaaggccaacgagcccgccaccacctccagcagcgatggggatagg
cctgagaaatccgagcggcctggagaaggccagccccaccttgatccccttggctcatat
tgtggggttaatggccctgcccgatccggagggatgggcctaaagtaccgggatcagcag
agaggtgcgtccatgagccgccgcatctccccccagggctgggccagacggagcgggaag
gaacagaacattcccccccggtcaccaaagtag
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