Oncorhynchus gorbuscha (pink salmon): 124031290
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Entry
124031290 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124031290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124031290
03036 Chromosome and associated proteins [BR:
ogo03036
]
124031290
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124031290
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124031290
PBAF complex
124031290
GBAF(ncBAF) complex
124031290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
124031290
NCBI-ProteinID:
XP_046198315
LinkDB
All DBs
Position
LG03:complement(35866120..35906841)
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AA seq
1062 aa
AA seq
DB search
MAVRKKDGGPNVKYFETSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPMKSFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEAKLLGKLKDIIKRHQGSVTEDKTCSSHVVVP
IPASLEEEEWVRPVMKRDKQVLLHWGYSPDSYDTWISASEVEAAVEDPPSPEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPKRKRISAKTLTDEVTTPGDERRDKKPGSAKKRKRSP
SPSPTPTSQESKKKNTKKGPTTPYTKSKRGQREEEPEDLTKDLDEPSPVPAVEEVTLPKT
ANTKKDSELTPVKGGTMTDLDEQEDESMETAEKEEEEGSPSVKGEPVKGSDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSS
LVPLQPKASQTPAAQQILSFPDKVKEKQPVDLQNFGLRTDMYSKKTGPPKSKTAANAMRD
WTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDMSSSLGPLA
YQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVE
EAARASGRQDPLYGLEGSGIAGTSLEEGDKPEESSEESKSDSQSSEEKRETKENKDGAME
EDEKQGENGKKEEERGREGEGERDRESEKTETEMGEREKEKEGKEALEEGQREGESEGER
KAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRH
FEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQTGGP
HPAPAPTGPPPQGPSATQSQPAPSIPAPQPAPSPAPSASSVPMTGPSSAQAQPTEPQPTP
SGPHSSPPRPPGHSSTNTTPTLHESSAPGDTLHSSTAAPTPQ
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaacgtaaaatatttcgaaacgtctgatacc
gtctcgcaattcgacaatgtccgcgtttggttgggcaagaattataaaaagtacatccag
gcggagccccccaccaacaagtctctgtccagcctggtggtccagctactgcagtttcag
gaggaggtgttcggacgacatgtcagcaacccacctctcaccaggctgccgatgaagagt
ttcctggactttaagtctggtggggctctctgccacattctggcagcagcctacaagttc
aagagtgatcagggctggcgcaggtttgactttcagaatccttctcggatggaccgcaat
gtggagatgttcatgactatcgagaaatccctggtacagaataactgtctgagtcgacca
gtgatctacctgagctctgacattgaggccaagctgctggggaaactgaaggacataatc
aagagacaccagggctcagtgactgaagacaagacatgcagctcccatgtggtggttccc
atccctgccagtcttgaggaggaggagtgggtgcgtccggtgatgaagagagacaagcag
gtgctgctccactggggatactctcctgacagctatgacacctggatctcagccagtgag
gtggaggcagctgtggaagatccgcccagcccagagaaacccagaaaggtccatgccaag
tggatcctggacctggaccagtttaacgagtggatgaatgaggaggactatgaggtcgga
gaggggggccccaagaggaagaggatctcagccaagaccctgacggacgaggtgaccacc
ccaggggacgagcgccgggacaagaagcccggcagcgccaagaagaggaagcgctcaccc
tccccctcgcccactccaacatcccaggagagcaagaagaagaacaccaagaaagggccc
accaccccgtacactaagtctaagcgaggccagagagaggaggagccagaggatctgact
aaagatctggatgaaccatcacctgtacctgctgtagaggaggtcaccctacctaagaca
gccaacactaagaaagactctgagttgacaccagtgaaaggaggtaccatgacagacctg
gatgagcaagaggatgaatccatggaaactgcagaaaaggaggaggaggagggctctccg
agtgtgaaaggagagccagtgaaagggtcggacctccatgaggacaacgtgactgagcag
acccaccacatcatcattcccagctacgctgcatggtttgactacaacagtgtccatgct
attgagcgcagagccctcccagagtttttcaatggcaagaacaaatccaaaacccctgag
atttacctggcctacaggaacttcatgattgacacgtacaggctgaacccgcaggagtac
ctcacctccaccgcctgtcgtaggaacctggccggagatgtgtgtgccatcatgagggtg
catgcattcctagagcagtggggtctgatcaactaccaggtggattcagagagccggccc
acccccatgggccccccgcccacctcccacttccacgtcctggctgacaccccttccagc
ctggtgcccctgcagcccaaggcatctcagactccggcagcccagcagattctgtcattc
ccagataaggtgaaggaaaagcagccagtcgacctgcagaactttggcctgaggacagac
atgtacagcaagaagactgggcctcctaagagtaagactgctgccaatgccatgcgagac
tggaccgaacaggagacactactgctgctagagggtctggagatgtacaaggatgactgg
aacaaggtgtcagagcacgtgggctcacgtacccaggacgagtgtatcctgcacttcctg
cgtctgcccattgaggacccatacctggaggacatgtcctcatccctgggccccctggcc
taccagcccgtccccttcagccaggcaggcaaccccgtcatgagcaccgtggccttcctg
gcctccgtggtggacccccgcgtggcctccgcagccgccaagtctgccctggaggagttt
tctcgtatgaaggaggaggtcccagcagcactggtggaggcccatgtgaggagggtggag
gaggcggcgcgggccagtggcagacaggaccccctctacggcctggagggcagcggcatc
gcaggcaccagcctggaggaaggagacaaacctgaagagagcagtgaggagagtaagagt
gacagccaatccagtgaggagaagagggagaccaaggagaataaagatggagccatggaa
gaggatgagaagcaaggagaaaacgggaagaaggaggaggagagagggagagagggagaa
ggagagagagaccgagagtctgagaagacagagacagagatgggtgagagagagaaggag
aaggaagggaaggaggccttggaggagggccagagagaaggagagagcgagggcgaaagg
aaggcgaaggtggaacgggatgtgggagaggggaacctggctaccgctgctgcctctgct
ctggctgctgctgccgtcaaagccaagcacctggctgcggtggaggagagaaagatcaag
tctctggtggctctgctggtggagactcagatgaagaagctggagatcaaactgagacac
tttgaagagctggagactatcatggaccgagagagggaggctttggagtaccagaggcag
cagctgctggcagaccgtcagtcgttccacatggagcagttgaagtatgcagagatgagg
gcgcgtcagcagcacttccaacagatccagcaccagcagcatagccagactggaggccca
caccccgccccggctcccacgggccccccaccccagggcccctcagccacccagtcccag
ccggcccccagtatccctgcaccacaaccagctcccagcccagcaccctctgcctcctcc
gtccccatgactggcccttcctctgcccaggcccagcccactgagccccagccgacccct
agtggtcctcactcctcacctccccgcccgccaggccactccagcaccaacaccacccca
acactccacgagtccagcgcccctggggatacactccactcctcaaccgctgctcccact
ccacagtga
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