Oncorhynchus gorbuscha (pink salmon): 124031333
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Entry
124031333 CDS
T07892
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420
Nucleotide excision repair
ogo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124031333 (ercc1)
03460 Fanconi anemia pathway
124031333 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124031333 (ercc1)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
124031333 (ercc1)
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Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
124031333
NCBI-ProteinID:
XP_046198390
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Position
LG01:113738162..113749016
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AA seq
382 aa
AA seq
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MEKKRFNINLDDSAFTKERAPVKPLFQPSSKACQSASSSSSSSTTSETKAQPAPPSSAGQ
PLSYAEFIVQSKGHAPQRVPSAPQRVELSRAAAGTGTGIDTDTGSLKQGPSQGAQGGPDV
TSSSSSVGCERPRAQGTKDPGSGGEGEEGQRAGTEQKQGEGQGSEGSNILSHPKPVGSGN
SIIVSPRQRGNPILKFVRSVPWEFGDVVPDYVLGQTTCALFLSLRYHNLNPNYIHDRLKL
LGQTFTLRVLLVLVDVKDPHHSLKELARICIMADCTLILAWSPEEAGRYLETYKSYEKKP
ADLLKEHVEKDYLSKVTDCLTTVKSVNKTNSITLLSTFSSLEGIITATKEDLVLCPGLGP
QKARRLYDVLHQPFLKAKKKDS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaggtttaatatcaacctagacgactctgccttcacaaaagaaagagcc
ccggtgaaacccctgttccagccctcctctaaggcatgccagagtgcatcatcatcatca
tcatcatcaaccacctctgagaccaaagctcagcctgcacccccgtcatctgctggccaa
ccactatcctacgcagagttcattgtccagagcaaaggccatgcacctcagcgagtcccc
tcagctccacagagagtggagctgtccagggctgctgcaggaacggggacagggatagat
acagacactggtagtttgaagcagggtcccagtcaaggagcacaaggtgggcctgatgtg
acgtcgtcgtcgtcctctgtggggtgtgagaggcctcgggcccaggggacaaaggatccg
gggtctggtggagagggagaggaggggcagagggctgggactgagcagaagcagggggag
ggtcaagggtcagagggcagcaacatcctaagtcatcctaaaccagtggggtctggtaat
agtatcatagtcagccccagacagagaggaaaccccattctgaaatttgtgaggagtgtg
ccttgggagtttggagacgtggtccctgactatgtcctgggacagacgacctgcgctctc
ttcctcagtctgaggtaccacaacctcaaccccaactacattcacgaccgtctcaaactg
ttgggccagaccttcaccctcagggttctactggtgttagttgatgtgaaagaccctcac
cattctctgaaagagctggctcgtatctgcatcatggctgactgcactctcatcctggcc
tggagtccagaggaggcggggcgttacctggagacgtacaagtcctatgagaagaaacca
gctgatctgctgaaggaacatgtggagaaagactacctgtcgaaggtgacggactgtctg
accactgtgaagtctgtcaacaagactaactcgatcactctgctgtcaaccttctcttcc
ttagaggggatcatcactgcaactaaagaggacctggttctctgtcctggactgggacca
cagaaggccagacgtctctatgacgtgctacaccagcccttcctcaaggccaagaagaaa
gacagctga
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