KEGG   Oncorhynchus gorbuscha (pink salmon): 124031356
Entry
124031356         CDS       T07892                                 
Symbol
sort1a
Name
(RefSeq) sortilin
  KO
K12388  sortilin
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04142  Lysosome
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    124031356 (sort1a)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6
Other DBs
NCBI-GeneID: 124031356
NCBI-ProteinID: XP_046198426
LinkDB
Position
LG03:38699555..38722592
AA seq 815 aa
MTPLYSIVVVWLFTYALCEDFCKNANFFGGAHTTFVNTPRPRDSPVLSGHNLNKRSTDPD
GETCKSLTGFESTLKNNTHTYAFNDLSGSVSLAWVGDGTGVLLVLTTFQVPVFMIRLGQS
KLYRSEDYGKTFQDVTHLINNTFVQTEFGIAIGPDNSGRVIMTGDVSEGGGSRIFRSLDY
GHSFSLVDLPFFPLIQTLYNPNDSNVLLTLSITLDLWLSEDFGSTWRKIHDSVCLVRWGP
EDSIYFTTNSNGSCNDKGMLELKRSLDYGKTIKTIASKIYSFVLGGRFVFASIMTGSGTQ
RMIHVSVDGGDVWNMAQLPTVGHEQFYSILAASDDMVFMHVDEPGDTGIGTIYISDDRGT
LYSKSLERHLYTATGGDTDFTNVTSLRGVYMTSVLTEDGSVETVVSFDQGGEWRPVQRPR
NSRCDTETITNRPDRCSLHIHALYSISMKMNVPLLPLTQFNAIGLILAHGSVGDPVSVLS
PDVYVSDDGGYSWLRALTGPHHYAILDSGGLLVAVEHTSVPVNQIKFSTDEGQCWHVYNF
TSEPLYFTGLALEPGAHSMNLSLWGYRVGLQGPLSHYWVSVTIDFKQLLSRDCGEGDYVQ
WLAHSDDLNNPNDGCILGYKERFLRLRKDSVCWNGRDYVITTQPTPCQCTLDDYQCDYGY
HRTENSSECVEQADLKGHVLEFCLHGTTEQLQTSGYRKIPGDRCVGGIQPKRKEIDLRRN
CISNALHPKPLTEANLLSSASIVLVVMVILLISAATGVMLVKKYVCGGRFLVHRYSVLQQ
HAEANGIEGVDELDTHTTEMGKTHYHEDSDEDLLE
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgactccgctgtatagcatcgttgttgtctggttatttacctatgcgctatgcgaggat
ttttgtaagaatgccaacttcttcggcggggcacacacaacgttcgtgaatacaccgcga
ccgagagattcgccggtgttgtctggacacaaccttaacaaacggagcactgaccccgac
ggagagacgtgcaaatctctaacgggattcgagtccacgctgaaaaataacacacacacc
tatgccttcaatgacctgagtggctcagtgtctctggcctgggtgggagatggcacaggg
gtgcttctggtgctgaccacattccaggtgcctgtcttcatgattcgccttggccagtct
aaactctaccgcagcgaggactatggaaagacattccaggacgtgacccacctgatcaac
aacacctttgttcagactgagtttggcatcgccattggtcccgacaactctggaagggtg
atcatgacaggtgatgtgtcagagggagggggatcccggattttccgctcgctggattat
ggacatagtttttccctagtggacctccccttctttcctctgattcagacactgtataac
cccaatgacagtaacgtgctactgaccctcagcatcacgttggacctgtggctgtctgaa
gactttggctccacctggaggaagatccatgacagtgtgtgtctggtcagatggggtccc
gaagacagcatctacttcaccacaaactctaacggatcctgcaatgataagggcatgttg
gagctgaagaggtctctagactatggcaagaccatcaagaccatcgccagcaagatctac
tcctttgtacttggaggacgctttgtcttcgcctccatcatgactggctcgggtacccag
cgtatgatccatgtgtcggtagatggtggtgatgtgtggaacatggctcagctccctact
gttggccatgagcagttctactccatattggcagccagcgacgacatggtgttcatgcac
gtagacgaacctggagacactggcatagggactatctacatatcagatgacagagggaca
ctttactccaagtctctggagcgccacctctacacggccacagggggcgacactgatttc
accaacgtcacctcgctcaggggtgtctacatgaccagcgtactcacagaggatggctcg
gtggagactgtggtgtcgtttgaccaggggggggaatggcggccggtacaacggcctcga
aacagccgctgtgacactgagaccatcaccaaccggccggaccgatgcagcctgcacatc
cacgccttatacagcatctctatgaagatgaacgtccctctgctgcccctcacacagttc
aacgctataggcctcattctggctcatggtagtgtgggtgacccagtgtctgtgctgtct
cctgatgtgtatgtgtctgatgatggaggctactcctggctgagagcgttaaccggaccc
caccactacgccatcctagactctggaggccttttggtggctgtcgaacacacatctgta
cccgtcaaccagatcaagttttccacagacgagggccagtgttggcatgtgtataacttc
accagtgagccgctgtatttcacagggctggcgttggagcctggagcccactccatgaac
ctcagcctgtgggggtacagagtgggcctgcagggtcccctcagtcactactgggtctct
gttaccatcgacttcaaacagctactctccagagactgtggggagggggactatgttcag
tggttggcgcactctgatgacctcaacaaccccaatgacggatgcattctgggatataag
gagcgtttcctgcggctgaggaaagattctgtctgctggaacggacgtgattatgtcatc
accacccagcccaccccctgccaatgcacactggatgactaccagtgtgactatgggtac
caccgtacagagaacagttctgagtgtgtggagcaggcagacctgaagggccatgttctg
gagttttgtcttcacggcaccacagaacagctgcagaccagtggctaccggaagattcca
ggcgaccggtgtgtgggcgggatccagcctaagaggaaggagattgatctgaggagaaac
tgcatcagcaatgcacttcacccaaaacccctgacggaggccaacttgttaagctctgcc
tctatagtactggttgtaatggtgattttgctcatcagcgctgccacaggggttatgctc
gtcaagaaatatgtctgcggagggaggttcctggtacacaggtactcagtgctacaacag
catgcggaggccaatgggatagagggagtggatgaactggacacacacaccactgagatg
ggcaaaacacactaccacgaagactcagatgaggacctcttggagtga

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