Oncorhynchus gorbuscha (pink salmon): 124031356
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Entry
124031356 CDS
T07892
Symbol
sort1a
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124031356 (sort1a)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
124031356
NCBI-ProteinID:
XP_046198426
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Position
LG03:38699555..38722592
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AA seq
815 aa
AA seq
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MTPLYSIVVVWLFTYALCEDFCKNANFFGGAHTTFVNTPRPRDSPVLSGHNLNKRSTDPD
GETCKSLTGFESTLKNNTHTYAFNDLSGSVSLAWVGDGTGVLLVLTTFQVPVFMIRLGQS
KLYRSEDYGKTFQDVTHLINNTFVQTEFGIAIGPDNSGRVIMTGDVSEGGGSRIFRSLDY
GHSFSLVDLPFFPLIQTLYNPNDSNVLLTLSITLDLWLSEDFGSTWRKIHDSVCLVRWGP
EDSIYFTTNSNGSCNDKGMLELKRSLDYGKTIKTIASKIYSFVLGGRFVFASIMTGSGTQ
RMIHVSVDGGDVWNMAQLPTVGHEQFYSILAASDDMVFMHVDEPGDTGIGTIYISDDRGT
LYSKSLERHLYTATGGDTDFTNVTSLRGVYMTSVLTEDGSVETVVSFDQGGEWRPVQRPR
NSRCDTETITNRPDRCSLHIHALYSISMKMNVPLLPLTQFNAIGLILAHGSVGDPVSVLS
PDVYVSDDGGYSWLRALTGPHHYAILDSGGLLVAVEHTSVPVNQIKFSTDEGQCWHVYNF
TSEPLYFTGLALEPGAHSMNLSLWGYRVGLQGPLSHYWVSVTIDFKQLLSRDCGEGDYVQ
WLAHSDDLNNPNDGCILGYKERFLRLRKDSVCWNGRDYVITTQPTPCQCTLDDYQCDYGY
HRTENSSECVEQADLKGHVLEFCLHGTTEQLQTSGYRKIPGDRCVGGIQPKRKEIDLRRN
CISNALHPKPLTEANLLSSASIVLVVMVILLISAATGVMLVKKYVCGGRFLVHRYSVLQQ
HAEANGIEGVDELDTHTTEMGKTHYHEDSDEDLLE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgactccgctgtatagcatcgttgttgtctggttatttacctatgcgctatgcgaggat
ttttgtaagaatgccaacttcttcggcggggcacacacaacgttcgtgaatacaccgcga
ccgagagattcgccggtgttgtctggacacaaccttaacaaacggagcactgaccccgac
ggagagacgtgcaaatctctaacgggattcgagtccacgctgaaaaataacacacacacc
tatgccttcaatgacctgagtggctcagtgtctctggcctgggtgggagatggcacaggg
gtgcttctggtgctgaccacattccaggtgcctgtcttcatgattcgccttggccagtct
aaactctaccgcagcgaggactatggaaagacattccaggacgtgacccacctgatcaac
aacacctttgttcagactgagtttggcatcgccattggtcccgacaactctggaagggtg
atcatgacaggtgatgtgtcagagggagggggatcccggattttccgctcgctggattat
ggacatagtttttccctagtggacctccccttctttcctctgattcagacactgtataac
cccaatgacagtaacgtgctactgaccctcagcatcacgttggacctgtggctgtctgaa
gactttggctccacctggaggaagatccatgacagtgtgtgtctggtcagatggggtccc
gaagacagcatctacttcaccacaaactctaacggatcctgcaatgataagggcatgttg
gagctgaagaggtctctagactatggcaagaccatcaagaccatcgccagcaagatctac
tcctttgtacttggaggacgctttgtcttcgcctccatcatgactggctcgggtacccag
cgtatgatccatgtgtcggtagatggtggtgatgtgtggaacatggctcagctccctact
gttggccatgagcagttctactccatattggcagccagcgacgacatggtgttcatgcac
gtagacgaacctggagacactggcatagggactatctacatatcagatgacagagggaca
ctttactccaagtctctggagcgccacctctacacggccacagggggcgacactgatttc
accaacgtcacctcgctcaggggtgtctacatgaccagcgtactcacagaggatggctcg
gtggagactgtggtgtcgtttgaccaggggggggaatggcggccggtacaacggcctcga
aacagccgctgtgacactgagaccatcaccaaccggccggaccgatgcagcctgcacatc
cacgccttatacagcatctctatgaagatgaacgtccctctgctgcccctcacacagttc
aacgctataggcctcattctggctcatggtagtgtgggtgacccagtgtctgtgctgtct
cctgatgtgtatgtgtctgatgatggaggctactcctggctgagagcgttaaccggaccc
caccactacgccatcctagactctggaggccttttggtggctgtcgaacacacatctgta
cccgtcaaccagatcaagttttccacagacgagggccagtgttggcatgtgtataacttc
accagtgagccgctgtatttcacagggctggcgttggagcctggagcccactccatgaac
ctcagcctgtgggggtacagagtgggcctgcagggtcccctcagtcactactgggtctct
gttaccatcgacttcaaacagctactctccagagactgtggggagggggactatgttcag
tggttggcgcactctgatgacctcaacaaccccaatgacggatgcattctgggatataag
gagcgtttcctgcggctgaggaaagattctgtctgctggaacggacgtgattatgtcatc
accacccagcccaccccctgccaatgcacactggatgactaccagtgtgactatgggtac
caccgtacagagaacagttctgagtgtgtggagcaggcagacctgaagggccatgttctg
gagttttgtcttcacggcaccacagaacagctgcagaccagtggctaccggaagattcca
ggcgaccggtgtgtgggcgggatccagcctaagaggaaggagattgatctgaggagaaac
tgcatcagcaatgcacttcacccaaaacccctgacggaggccaacttgttaagctctgcc
tctatagtactggttgtaatggtgattttgctcatcagcgctgccacaggggttatgctc
gtcaagaaatatgtctgcggagggaggttcctggtacacaggtactcagtgctacaacag
catgcggaggccaatgggatagagggagtggatgaactggacacacacaccactgagatg
ggcaaaacacactaccacgaagactcagatgaggacctcttggagtga
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