Oncorhynchus gorbuscha (pink salmon): 124031379
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Entry
124031379 CDS
T07892
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5-like isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124031379
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124031379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
PHD-1st_NSD
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
124031379
NCBI-ProteinID:
XP_046198487
LinkDB
All DBs
Position
LG03:40651107..40688362
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AA seq
2057 aa
AA seq
DB search
MPGSLSNEDEGQEDMDFEDEIPDEDEDGQRNTVPLTPLDSFFTDNDSLKQQKKKKPKKMK
EGKMPKVKKRKKEGGGGGGVGGGGSDLKEQIPEREDDRPLQGPEIGSESESSTYASTTKK
KKKPKDKKEKKPKRKKREEEEEDDDDDDDEDDENNKEPKSSSQLMQEWGLEDVQYGFTEE
DYTTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAV
AAAVETVTVASPTSVKEITTLSSSQPGQIRKAKTKEGKGPGVRRKTKTVKEVKKKSKGRK
TKTKKKASSSEEDFGLEESDFDDVSIHSASVRSDTSGNAKKKARKGRKKRKREDGDGYET
DHQDYCEVCQQGGEIILCDTCPKAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDD
DEEEEVAVEEEDDHLEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCM
CPPPKGKVQRILHWIWGNPPLPTEVPPGPNGETVDPLVKPPLKGHPERELFVKWAGLSYW
HCSWVSELQLELYHAVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRKSKDPEYAAMEER
FYRYGIKPEWMVIHRILNHSYDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPEYHNAKHSY
WDHREQMIGDDQRPLVVRKGKKGKEEEKRREREIPPNAPIIDPTIKFEHQPWYINATGGT
LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLS
TIINWEREFEMWAPDFYVVTYTGDKESRAVIRENEFTFEDSVVKTGRKVFRMKKDTAIKF
HVLLTSYELITIDQTILGSINWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPL
QNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKN
MPSKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLF
PVAAVEAPVLPNGSYDGNQLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDF
LEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYD
SDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGS
KTGSMSKQELDDILKFGTEELFKDEMEAAARAMGSHQKLCKNNGDIKDGDEGSVIHYDDN
AISKLLDRSQNATEDTEIQNMNEYLSSFKVAQYVVKDEDAEEEPQREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDDLSDNHSEYSVGSEDED
EDFEERPEGGRRHSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMP
PQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLT
RIGVMSLVRKKVQEFEHVNGKYSTPDLIPIGLELKKLTESLSSDPNTPVPASPAATPQPP
GSPVPPEKMDSISGPAEDKEPTEQECKKLPELETHVSTESSSQVEKTDIAPDSDETEKGS
TEDKPVSSEECSEMTDIPSALIEPSINPKEPPSIQTELLSNQSSPKAEPCRETEKSLEKG
DCDPAPAKPEEKELNPVVSDEAKSEDLLAPEGRLNGEKEAQEEMEEVRRELLEKKGFKMR
FMFNIADGGFTELHTLWQNEERAAVSSGKMYDIWHRRHDYWLLAGIVTHGYARWQDIQND
PRYAIHNEPFKTEMHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPA
MALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKGLSSPSVYTAAGLKHCLQTQDLV
LNQLEELLSDMKADVTRLPNMLSRIPPVSSRLQMSERSILSRLTSRGNEPPPQQPFGQGS
FACSQMYSTGFGGSFRGPAGEAMVNYSQMPLGPYVSVSNGPPPPSSHLDKKSCDHLRDVT
TPDLKSGKPSDVICIED
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcgttaagcaatgaagacgagggacaagaggacatggattttgaagacgaa
ataccagatgaggatgaggatggtcaacgtaacactgtcccgctcacacctctggacagc
tttttcactgacaacgactccctcaaacaacagaagaagaagaaacccaaaaagatgaag
gagggaaagatgcccaaagtcaagaagaggaaaaaggagggaggaggaggtggaggagta
ggaggtggtggcagtgacttgaaggagcagatccctgagcgggaggatgaccgtccactg
cagggtccagagattggctcagagagcgagagcagcacctacgcctctaccacaaagaag
aagaagaaacctaaggataagaaagagaagaaacccaaacggaagaagagagaagaggag
gaggaggatgacgatgatgatgatgacgaagatgatgaaaataataaggagcccaagtcg
tccagtcagctgatgcaggagtggggtctggaggatgtgcagtatggcttcacagaggag
gactatacaaccctcaccaactacaaggccttcagccagttcctcaggccacttattgcc
aagaagaaccctaagatccccatgtcaaagatgatgacagtgttaggggccaagtggcga
gagttcagcgctaacaaccccttcaaaggcacctctgcaactgctgtggctgctgcggtg
gctgctgccgtggaaacggtcaccgttgcctcacccacctctgtcaaagagatcactaca
ctgtcaagttctcagcctgggcaaatcagaaaagccaaaaccaaagagggaaaggggcct
ggggttcgacggaaaacaaagactgtaaaggaggtaaagaagaaaagtaaagggaggaag
accaaaacaaagaagaaagcatcctcgagtgaggaggactttgggctggaggagtcggac
tttgatgatgtcagcatccacagtgcctcggtgcgctctgatacctcagggaatgccaag
aagaaagcccggaagggtcggaaaaaaaggaaaagagaggatggggatggctatgagaca
gaccaccaggactactgtgaggtgtgccagcagggaggggagatcatcctgtgtgacacc
tgtcccaaagcctatcacctggtgtgtctggaccctgagctggagaaagctcccgagggc
aagtggagctgcccccactgtgagaaggagggcatccagtgggaggccaaagatgatgac
gatgaggaagaggaggttgcggttgaggaagaggacgaccacctggagttctgcagagtg
tgtaaagacggaggggagctgctgtgctgtgacacctgcccctcctcctaccatatccac
tgcctcaaccctccactgcctgagatacccaatggggagtggctgtgcccacgctgcatg
tgcccacctccaaaggggaaggtacagagaattctccactggatttgggggaaccccccc
ttaccaactgaggtgccccctggccccaatggagagactgtggacccgctggtaaagccc
cccctgaagggccacccggagagggagctgtttgtcaagtgggctggtctctcctactgg
cactgctcctgggtcagtgaactgcagttggagctgtaccacgcggtgatgtaccgtaac
taccagaggaagaacgacatggacgagccacctccgtacgactacggctctggggaggag
gagctgaacaacgagaagaggaagagtaaagacccagagtacgctgccatggaggagaga
ttctaccgctacggcatcaagccagagtggatggtcatccacaggatcctcaaccacagt
tatgataaggatggggatgtgcactacctgatcaagtggagagacctgccctatgaccag
tgcacctgggaggtggatgactttgacgtccctgagtatcacaacgccaaacactcctac
tgggaccacagggagcagatgattggtgacgaccagcgccctttagtggtgagaaaggga
aagaagggcaaagaggaggagaagaggagggagagagaaatccctcctaacgctccaatc
atagatcctaccatcaagtttgaacatcaaccctggtacatcaatgccactgggggaacc
ctacacccgtaccagctggaggggttgaactggctgcggttctcctgggcacagggcaca
gacactatcctggcagacgagatgggcctgggcaagactgtccagaccatcgtgttcctc
tactcactctacaaagagggtcactccaaagggccatacctggtcagtgcccccctgtcc
accatcatcaactgggagagggagtttgagatgtgggccccagacttctacgtggtgacc
tacactggggacaaagaaagccgggcggtcatccgggagaacgagttcaccttcgaggac
agtgtggtcaagacaggccgcaaggtcttccgtatgaagaaagacacggccatcaagttc
catgtgttgctgacgtcatatgagctaatcaccatcgatcagaccattctgggctccatt
aactgggcctgtctagtggtggacgaggcccacagactgaagaacaaccagtcaaagttt
ttcagaattctcaatgggtataagatctactataagctgctactgactggcactcctctg
cagaacaacctggaggagctgtttcacctgctcaacttcctcaccccagagagattcaat
aacctggaggggttcctggaggagtttgcagacatctccaaggaggaccagatcaagaag
ttgcatgatctgctgggcccacacatgctcaggagactgaaggctgacgtcttcaagaat
atgccttccaagacagagctcattgtacgagtggagctcagccccatgcagaagaagtac
tacaagtttatcctgacgcggaactttgaggcgctcaactccaagggcgggggcaaccag
gtgtccctgctcaacatcatgatggacctgaagaagtgctgcaaccacccctatctgttc
cccgtggcagctgtggaggcaccagtgttacccaatggctcttatgatgggaaccagctg
gtcaagtcctcaggcaaactcaccctgctccagaagatgctgaagaaactcaaagatgaa
ggacacagagttctcatcttctcccagatgactaagatgctggatctgcttgaggacttt
ctggaatacgagggctacaaatatgaacgcattgatggaggcatcacagggggactacga
caggaggctatcgaccgcttcaacgcaccgggtgctcagcagttctgcttcctcctctcc
acccgagctggaggcttgggcatcaacctggccacggcagacaccgtcatcatctacgac
tcagactggaaccctcacaacgatatccaggcattcagcagggcccaccgtataggtcag
aacaagaaggtgatgatctatcgctttgtgacgcgggccagcgtggaggagcgcatcacc
caggtggccaagaggaagatgatgctgacccacctggtggtgaggcccggcctgggctcc
aagaccggctccatgtccaaacaggagctggacgacatcctcaagttcggcactgaggag
ctcttcaaggacgagatggaggcagctgcacgggccatgggttcgcatcaaaaactctgt
aagaataatggggacataaaggatggagatgagggcagtgtcattcactatgatgacaat
gccatctccaagctgctggaccgtagccagaatgccacggaggacactgagatccagaac
atgaacgaatacctcagctccttcaaggtggcccagtatgttgtcaaagacgaggacgca
gaggaggagccccagcgggagatcattaagcaggaggagaatgtggatccagactactgg
gagaagctactgaggcaccactatgagcagcagcaggaggacctggcccgcaacctgggc
aaaggcaaacgcatccgcaagcaggtcaactacaacgacacgtctcaggaggaccaagag
tggcaggatgatctttcagacaatcattccgagtactccgtggggtccgaggacgaggac
gaagatttcgaggagaggccggaaggtgggcgcaggcattctcgcaggcagctgaagagt
gacagggacaaacctctgccacccctgctggcacgcgtagggggcaatatcgaggtgctg
gggttcaacgcccgtcagcggaaggccttcctcaacgctatcatgcgctggggcatgcct
cctcaggacgccttcaactctcactggctggtcagagacctgagagggaaaagtgagaaa
gagttcagggcctacgtgtccctgttcatgagacatctttgtgagcccggggcagacggg
gcggagacctttgcagatggggttccacgagaagggctgtcccgtcagcatgtcctcacc
aggattggggttatgtcactggtcaggaaaaaggtccaggagtttgagcatgtgaatggg
aaatacagcactccagacctgatccctattggactggagctgaagaaactgactgagagt
ctgtcctctgaccccaacacccccgtccctgctagccctgctgccacaccccagcctcct
ggaagtcctgtcccaccagagaagatggactcgatctcagggcctgctgaagacaaggag
cccacagaacaggaatgcaagaagctgccagaactggagactcatgttagtacagagtca
tcatcccaggtagagaagacggacatcgctcctgacagtgatgagacagagaaaggcagc
acagaggacaaaccagtctcctcagaggagtgcagtgaaatgacagacataccctccgca
ctgatagagccatccatcaatcctaaagagcctccatccatacagacagagctgttgtcc
aatcaaagctcaccaaaagcggagccctgtcgagagacagagaagtccttagaaaaagga
gactgtgatcctgctccagccaaacctgaggagaaggaactgaatccagttgtttcagac
gaggccaagagcgaggacttgctcgcgcccgagggacggctgaatggagaaaaagaagca
caggaggagatggaggaggtcaggagggagttactggagaagaagggtttcaagatgagg
ttcatgttcaacattgccgacggaggcttcacagagctgcacaccctgtggcagaacgag
gagcgggctgccgtgtcatctgggaagatgtatgacatctggcaccgtcgccacgactac
tggctactggctggcatcgtaacacatggctatgcccgttggcaggacattcagaacgac
ccacgctatgccatccacaatgagcccttcaagactgagatgcacaagggaaattacctg
gagatgaagaacaagttcctggctcgtcgctttaagctgttggagcaggctctggtgata
gaggagcagttgaggagggcagcgtacctgaacatgacccaggaccccagccacccggcc
atggccctaaacactcgctttgctgaggtggagtgtctggctgagtctcaccagcacctg
tccaaggagtctctggctggaaacaagccagccaacgctgtgctgcacaaaggtctgtca
tctcccagtgtgtacacagcagcaggactaaaacactgtctacaaactcaagatctggta
ctgaaccagctggaggagctgttaagtgacatgaaggcggatgtgacgcggcttcccaac
atgttgtcccggatccccccagtgtcttcgcgtctgcagatgtctgagaggagcatcctc
agccgcctcaccagccgcggcaacgaacctccgccccaacagccgttcggccagggctca
tttgcctgttcccagatgtacagcactggctttggtggcagtttccgggggcctgcaggt
gaagccatggtcaactatagccagatgcccctgggaccctatgtcagtgtgtccaacggc
ccccctcctccatccagccacttggacaagaagtcctgcgaccacctgagggatgtcacc
acccctgaccttaagtcaggcaagcccagtgatgttatctgtattgaagattag
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integrated database retrieval system
