Oncorhynchus gorbuscha (pink salmon): 124031381
Help
Entry
124031381 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124031381
03036 Chromosome and associated proteins [BR:
ogo03036
]
124031381
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124031381
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
124031381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
IQ_SEC7_PH
CFAP43_N
WD40_CDC20-Fz
SOS1_NGEF_PH
RHG20_PH
DUF7675
Motif
Other DBs
NCBI-GeneID:
124031381
NCBI-ProteinID:
XP_046198492
LinkDB
All DBs
Position
LG03:40707318..40895496
Genome browser
AA seq
1109 aa
AA seq
DB search
MMTCPVRDHSLLDEGDMLYEDVHREERPQGAGNDWSSSDFESYEEQSDSESKLPTLSKQY
SPDLRWLRERCARTKREIVMRLGGKNNYNTKVHQLMKAARSGTKDGLDKTRIAFMRKVSF
LHKKDHSEDVEDDAGYLDVAVSDVKHPPAQLSPMPEGLRSQQVVRRHILGSIIQSERSYL
ESLRRILEEYQSPLLEANPRILSPRKILPVFYRLREITQCHSMFQIALASRVAEWDSSEK
IGDLFVASFSKSMVLDVYSDYVNNFTNAMALVKKACMSKPAFLEFLKMKQASSVDRITLY
GLMVKPIQRFPQFILLLQDMLKNTPKGHVDCLPLQLALTELEMLAEKLNEQKRVSDQIAE
TQQLARSVSDRSLSKQLNSDQGSLVLCETLIETVYGERGQVLKSKERKVFLFNDILICAN
INVKGPLDISSLVPVGPKYTVKWSAPLLQVQVVEVGQEASPETLFQHGGAKHPGIACPPG
KVILGPPRLYQELQDLQHDLSVVEEVTLLVGTLQGTYQNLNTTVAQDWCLALQRLIRIKE
DQLQSANKCRLRLQVPGRPDKSGRPVSFMVVFNTPSPLSKISWVNRLHLAQIAQREENTP
GWFCAEDEGKTMSPFWPLLACRVPVFTTKSSDRKFEAALHNPGRFSAGCTLLPEGYLWVA
SGGDVTQGQVEIFSLNRPTLRPVKSLQVGAPVRCLEYVPEPRPSEEVEAVAFRSSTGVGN
TICLGLDDGSILVYGSVNTEAQCLLNLRNPHSCPVLCLKHCTNFLFAGLRDGTMMVYGRS
NGGELWEPDSSRTVIVGPEPVRTLLVLEDSMWASCANSVTIIEGSSLATQKFEVHPDPMV
TVAHMVRAGGGVWMAFSEGSSIRLFHTETLEHLQEINISTRVSLHNPGQKSMRVTSLLIH
QGLLWVGTVQGIIITLPVPKLEGIPKITGKGMTSLNAHCGPVDFLVATSSTLSPELLKRD
SLADGPDSACGEEDRSYSSSQESLPQSGSSQGEGGGKGRGVLLQYTLRSTSGLPGRPLTV
RGDEASDSSLESLEHSLEDGSIYEFSGDPEMWVQGRPSERDGGRRDRVISAAVISGGRGF
HRLREGTTERAGVESSETTLMMWELPLTV
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgtgccctgtgagggaccactctctccttgacgaaggggacatgctctatgag
gacgtgcacagagaagaaaggccacagggtgcaggcaatgattggagctccagtgatttt
gagagctacgaagagcagtctgatagcgagagcaagctaccaaccctcagcaagcagtac
tctcctgacctgcgttggctgagggagcgttgtgccaggaccaaacgtgaaatagtcatg
aggctgggtggcaaaaacaactacaacaccaaggttcatcagctaatgaaggccgccagg
agtgggaccaaggatggactggacaagaccagaatagcctttatgcggaaagtctccttc
ctgcacaagaaggaccactcagaggatgtggaggatgacgcagggtacctggatgtggct
gtgtcagatgtgaaacatcctcctgcacagctgagccctatgcccgagggactgcgcagc
cagcaggtggtcagacgtcacatcctgggctccatcattcagagtgagcgcagttatctt
gaatccctcaggagaatccttgaggagtaccagagccccttgctcgaggcgaacccacgc
atcctgagcccacggaagatcctgcctgtattttaccgcctacgggagatcactcagtgt
cactccatgttccagatcgcactggcgtcacgtgtggctgagtgggacagcagtgagaag
attggggacctatttgtggcctcgttttctaagtcgatggtgctagatgtttacagcgac
tatgtcaataacttcaccaatgccatggccctggtaaaaaaggcatgcatgtccaaacca
gccttcctggaattcttaaagatgaaacaggcgtccagtgttgaccggatcaccctgtac
ggcctcatggtgaagcccatccaacgctttccccagttcatcctattactgcaggacatg
ctgaagaacacacctaagggtcacgtagactgcctgcctctgcagctggctctgactgaa
ctagaaatgttggctgagaagctgaatgaacagaagcgtgtgtccgaccaaatagctgag
actcagcagctagcacgcagtgtcagcgaccgctcgctcagcaagcaactgaactcagac
caggggtcgctggtgctttgtgagacactgattgagacggtgtatggggagcgaggccag
gtcctgaagtctaaggagcgcaaagtcttcctcttcaacgatatcctcatctgtgccaac
atcaacgtcaaggggccccttgatatcagcagcctagtccctgttggtcctaagtacacc
gtgaagtggagtgcccccctgctgcaggtccaggtagtggaggtgggtcaggaggcctcc
ccggagaccctgttccaacacggtggtgccaagcaccctggcattgcctgtcccccaggg
aaagtgatcctgggtcctccacggctttaccaggaactccaggacctgcagcacgacctg
tctgtggtggaggaggtcacactactggtgggaacactacaggggacataccagaacctg
aacacgactgtggcccaggactggtgtctagctctacagagactcattcggatcaaggag
gatcaacttcagagtgccaacaagtgccgcttacgcctgcaggtgcctgggagaccagac
aagtcgggacgtcccgtcagcttcatggtggttttcaacacccccagccctctcagcaag
atctcctgggtcaaccggctgcacctggcccagattgcgcagcgagaggagaacacacca
ggatggttctgtgcagaggatgaagggaagaccatgtcaccattttggcctttactggcc
tgccgtgtgcctgtctttaccaccaaatcctcggacaggaagtttgaagctgcccttcac
aatccaggacggttctctgcagggtgcaccttgctacctgaaggctacctctgggtggcc
agcggaggagatgtcacccaggggcaggtggagatattctccctgaacaggcccacactg
cgcccagtaaagagcctccaggtgggggccccagtgaggtgtctggagtatgtgcctgaa
cctagaccctcagaggaggtggaggctgtagccttcaggagctctactggggtggggaac
accatctgtttgggactagatgatggaagcatcttggtgtatggcagtgtgaacactgag
gcccagtgcctgttgaacctgcggaaccctcatagctgccctgttctgtgcctcaaacac
tgcaccaacttcttgtttgctgggctcagggatggaaccatgatggtctatggaagaagt
aatggaggtgagttgtgggagccagactccagcaggactgttattgtgggcccagagccg
gtgaggacacttctggtactggaggactctatgtgggccagctgtgccaactctgtgacc
atcatcgagggctccagccttgccacccagaagtttgaggtacacccagaccccatggtg
actgtggcccatatggtgcgggctgggggaggagtttggatggcctttagtgagggctct
tctattcgcctgttccacactgagacactggagcatctgcaggaaatcaacatctccacg
cgagtatctttgcacaacccaggccagaagagcatgcgtgtcaccagcctgctcatccac
caggggctgctgtgggtgggcactgttcagggaatcatcatcactctgcccgtgcccaaa
ctggagggcatccccaaaataacaggaaaggggatgacctctctgaatgcccactgtggt
ccggtggacttcctggtggccacgtccagcaccctgtccccagagctactgaagagggat
tctttggcggacggacccgactctgcctgtggagaggaggaccgcagttactcctcctcc
caggagtctctgccacaatcaggctcctcccagggggagggggggggcaaggggcggggt
gtgttgctacagtacacgttgcgctccacttcggggttgccagggcgaccgctaacggtg
aggggcgatgaagcatcggactcctccctggagtctttggagcacagcctggaggacggc
tcaatctatgagttcagtggtgacccagagatgtgggtgcagggacgcccctctgagcgg
gacggggggcgcagggacagagtgatttcggcagcggtcatatctgggggcaggggtttc
cacagactgagggaagggacaacggagcgggcgggggtggagtcttcagaaacaaccctg
atgatgtgggaactaccactgacagtgtga
DBGET
integrated database retrieval system
