KEGG   Oncorhynchus gorbuscha (pink salmon): 124031444
Entry
124031444         CDS       T07892                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137  Mitophagy - animal
ogo04140  Autophagy - animal
ogo04144  Endocytosis
ogo04145  Phagosome
ogo04148  Efferocytosis
ogo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124031444
   04145 Phagosome
    124031444
   04140 Autophagy - animal
    124031444
   04137 Mitophagy - animal
    124031444
   04148 Efferocytosis
    124031444
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124031444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124031444
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124031444
   04031 GTP-binding proteins [BR:ogo04031]
    124031444
Membrane trafficking [BR:ogo04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    124031444
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124031444
  Exosomal proteins of other body fluids (saliva and urine)
   124031444
  Exosomal proteins of colorectal cancer cells
   124031444
  Exosomal proteins of bladder cancer cells
   124031444
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    124031444
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 AAA_22 AAA_7 G-alpha AAA_24 AAA_5 NTPase_1 ATPase_2 NACHT AAA_14 NB-ARC SRPRB ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 124031444
NCBI-ProteinID: XP_046198636
LinkDB
Position
LG03:46971426..46978414
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVIVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERSKPSAEACSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacgtctaggaagaaagtactacttaaagtcatcatcctgggagactctggagttggg
aagacgtccctgatgaaccagtatgtgaataagaagttcagtaaccagtacaaagccaca
attggagctgatttcctgacgaaagaagtgattgtggacgacaggcttgtcaccatgcag
atctgggacacagcagggcaggagaggttccagtctctgggcgtggcgttttaccgcggg
gcagactgttgcgtgctggtgtttgacgtgactgcccccaacaccttcaagaccctagac
agctggagggacgagttcctcatacaggccagcccccgagaccccgagaacttccccttc
gtggtgctaggcaacaagattgacctggagaacagacaggtgacgactaaacgagcacag
gcctggtgtcagagcaagaacaacatcccctacttcgagaccagcgctaaggaggccatc
aacgttgaacaggctttccagactattgcacgcaatgctcttaaacaggagacagaggtg
gagttgtacaatgagttccctgaaccgataaagctggacaggaacgaacgttccaagcca
tcagcggaggcctgcagctgctga

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