Oncorhynchus gorbuscha (pink salmon): 124031458
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Entry
124031458 CDS
T07892
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124031458
04519 Cadherin signaling
124031458
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124031458
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Major cadherins
124031458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Ig_CLSTN
Fibulin_C
F59B103_C
NCMAP
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
124031458
NCBI-ProteinID:
XP_046198652
LinkDB
All DBs
Position
LG03:complement(47440370..47698777)
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AA seq
926 aa
AA seq
DB search
MNLGAVLILTCTLVVGTSWATKADQRPKPPCRPGFSESFYTVFVSRDLLQGQNILKDTTL
SSERVKFDDCQHSKAVDFESSDPNFSVRPDGSVYAEQEVANLSDPVQFMVTARGGHDPHI
WETTVKLALAGHPPSVPVSQIGVEDMIARAWDSNPRVIKFPRKHQRSSSANGLRRQKRDW
VIPPINVPENSRGPFPQMLVRIRSDQDLEKGIRYSITGAGADQPPIDVYNIDPVHGKMFV
TRPLDREERASYHLRAHAVDMNGNKVESPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSK
PGTLVMQVTANDSDDDTTANGMVRYRILSQTPHMPIPNMFTINSETGDIFTVAAGLDREK
VSQYTIIVQATDMEGNLNFGLSNTATALISVTDINDNPPELTARTFSGEVPENRVNVVVA
NLTVIDRDQPHSPNWAAQYRIASGDPQGHFLIRTNPVNNDGMVTVVKPVDYEQNRAFMLT
VIVSNKAPLASGIQSSLQSSAGVTISVQDVNEPPVFPSNPKSIRFEEGVPAGTTLTVFAA
QDPDLFIHQTVRYSKLSDPANWLRINRTNGQITTMAVLDRESMYVRNNIYEATFLAADNG
SPPASGTGTLQIHLIDVNDNAPVLLPKEAQVCERASPRSRVNITASDADADPHVGPFVFE
LPSYPPSVRRNWTVSRISGDYAQLRLRIPYLDAGVYEVPIIVSDSGNPPLSNRSMIKVKV
CPCDDNGDCTTTGAVAAAGLGTGAIIAILICIIILLTMVLVFVMWMKRREKERQAKPLLI
DPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPEALDHIICKPTGVRRVDERPVIAESQY
PIRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGD
QDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaggcgccgttcttatactgacgtgcaccttagttgtgggcacatcttgggcg
accaaggcagaccaacgacctaaacccccatgcagaccaggcttttccgagagcttctac
acagtctttgtctctagggatctactgcaaggccagaacattctcaaagacaccaccctg
tcgagtgaacgtgtgaagtttgacgactgtcagcacagcaaggctgtggacttcgagagc
agcgaccctaacttcagtgtgcgtcctgacggctcggtgtacgcggagcaggaggtggcc
aacctgtctgatccagtccagttcatggtgaccgcccgcggaggtcatgaccctcatatc
tgggagaccacggtcaagctggccttggctggccacccgccttctgttcctgtgagtcag
attggggtggaggatatgattgcaagggcctgggactctaatcccagggttatcaagttt
ccacggaaacatcaaagaagctcttctgccaatggtctgagacgacagaagcgagactgg
gtcatcccaccaatcaatgtgcccgaaaactctagaggacccttcccacaaatgcttgtc
agaatccgctcggaccaggacctggagaaggggatccgctacagcatcactggagcaggg
gcggaccagcctcccattgacgtgtacaacattgaccctgtgcacggcaagatgtttgtc
accagacccctggacagagaggagagggcctcctaccatctgcgggcccatgctgtggac
atgaacgggaacaaggtggaaagccccatagacctgtacatctacgtcatcgacatgaat
gacaaccggccagagttccagaaccaggtctacaacggctctgtggctgaaggctctaaa
ccaggcacgttagtgatgcaggtgaccgccaacgactcagatgacgacaccacagccaat
gggatggtgcggtaccggatcctatcccagaccccccacatgccaatccccaatatgttc
accatcaacagcgagacgggagacatcttcacggttgccgccggcttggacagggagaaa
gtgtcccagtacaccatcatcgtccaggccacggacatggaggggaacctgaactttggc
ctgtccaacacggccactgccctcatctctgtgaccgacatcaacgacaaccctcccgag
ctgaccgccaggacgttttcgggggaggtcccagagaacagggtgaatgtggtggtggcc
aatctgacagtgattgacagggatcagcctcacagccccaactgggctgcccagtaccgc
atcgccagcggagacccccagggtcacttcctcatccgcaccaaccctgtcaacaatgac
ggcatggtcactgtggtcaagccagtggactatgagcagaacagggccttcatgctgaca
gtgatagtctctaacaaggcccctctggccagtgggatccagtcttctctccagtcttca
gctggggtcaccatctccgtacaggatgtcaacgaaccccctgtcttcccttccaacccc
aagtccatccgcttcgaggagggtgtccctgcaggcaccacactcaccgtgtttgctgcc
caagaccctgacctcttcatccatcagactgtccggtactcgaagctgtctgacccagct
aactggctgaggatcaacaggaccaacggtcagatcaccaccatggccgtgctggacagg
gagtctatgtacgtcaggaacaacatctatgaggccaccttcctggctgccgacaatggc
tctcccccagccagtgggacaggcaccctacagatacatctgatagatgtgaatgacaac
gctccagtgctgttgcccaaggaggcccaggtgtgtgaacgggccagcccccgctccagg
gtcaacatcacagcctccgacgccgacgctgaccctcacgtggggccttttgtgttcgag
ctgccctcctacccccctagcgtccgccgcaactggaccgtctcccgcataagcggtgac
tatgcccagctgagactgaggattccctacctggatgcaggggtgtatgaggttcccatc
atagtgtcggactctgggaacccgcccctctctaacaggtctatgataaaggtcaaggtg
tgtccgtgtgacgacaacggagactgtactaccaccggagctgtagccgccgctggactg
gggaccggagcgatcatagccatactcatctgtatcatcatactgcttacaatggtactg
gtgtttgtgatgtggatgaagcggagggagaaggagcgtcaggccaagcccctgttgatt
gacccagaggacgacgtcagagacaacatcctgaaatacgatgaggagggaggaggagag
gaggaccaggactatgacctaagccaactgcagcagcccgaggctctggaccacatcatc
tgtaaaccaacgggggtgcgcagggtggacgagaggcctgtcatcgctgagtcccagtac
ccaatcagacctagcctgcctcatcccggagatattggagacttcatcaacgacggtctg
agggcagcagacaacgaccccacagccccgccctatgactccctgctggtgtttgactat
gagggcagcggctccacggccggctccgtcagctccctcaactcctcaagctcaggggac
caggactacgactacctcaacgactggggcccccgcttcaagaagctggctgacctctac
ggcggaggagacgacgactga
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