Oncorhynchus gorbuscha (pink salmon): 124031577
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Entry
124031577 CDS
T07892
Name
(RefSeq) RNA-binding protein 5-B-like isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124031577
Spliceosome [BR:
ogo03041
]
Complex A
Other components
Complex A specific factors
124031577
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GFIT
Motif
Pfam:
G-patch
OCRE
RRM_1
Zn_ribbon_RanBP
G-patch_2
DUF7066
GSIII_N
zf-C2H2_4
Vit_open_b-sht
Motif
Other DBs
NCBI-GeneID:
124031577
NCBI-ProteinID:
XP_046198946
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Position
LG03:complement(54716375..54727411)
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AA seq
868 aa
AA seq
DB search
MCKYLNCLQNLFSKKIIIGNLLHLFLNFVTTIEMGADKRVSRTERSGRYGGNNQGRGERR
ERGDQEREHVTRRWGEERRIERYDGGEHRGNRASPEQRDRKRRNNDGAEEGYHSDGDYPE
QDYRGEPGEEKESKTIMLRGLSLHVTEGDIRAALDQLEGPQPIDVRLMKKRTGISRGFAF
VEFYHLQDATRWMETNQKLLVIQGKSVAMHYSNPRHKFEDWLCNTCGLYNFRRRLKCFRC
GASKAECETNTTGVRETQQSGDYYGDTIILRNIAPLTTVEAIMTALAPYANLSTSNIRLI
KDKQTGQNRGFTFVQLSSPLEASQLLTILQGLQPPLKLDGKTIGVDYAKSARKDLLLPDC
NRISAFSVASTAIAAAQWSSSQPQQGAEGQLSEYSYLEEGYVPYTQDYQAYYQQAAGDLS
QGNGILGAAPATTGVVISQVAQVYQPRLISHTATQALQLAQQLEAKQTGVHSAAATITAP
VSTATATLSGLATDTAVPDTSTYQYDESSGYYFDPETGLYYDPNTHYYYNSQTQQYLYWD
SEKQTYVPASAADQTEQTANAAAASKEAKESKERKQEKPKSKTAQQIAKDMERWAKSLNK
QKENFKSSFQPVSQEERKEAAAADAGFTLFEKKQAGSLEMLMSEAVQRPEEQAPTNSAKV
GLVAAYSGDSDPEEGGAAEPERDGGEQGQDQLTDWKKMACLLCRRQFPNKDGLVRHQQLS
DLHKQNLEVHRRSKLSEAELEELERKETEMKYRDRAAERREKYGIPEPPAPKKKKFTAQP
APVVNYEQPTKDGLNSDNIGNKMLQAMGWQEGRGLGRNQQGITAPIEAQLRAKGAGLGTK
GSSYGLSASDTYKDAVRKAMFARFTEME
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaagtacttgaattgtttgcaaaacctatttagcaaaaagattatcatcgggaat
ctcctacatctttttttaaatttcgtgacaaccattgaaatgggagctgataagcgggtg
agtcgcacagagcgtagtggcagatacggcggcaacaatcagggccggggtgagaggcga
gagcgaggagaccaggaacgagagcacgtcacgcgacgctggggtgaagagagacgcatc
gaacgctacgatggaggggaacaccgggggaacagagccagtccagagcagagagacagg
aagcggcggaacaacgatggagctgaagaaggctaccactctgatggagactacccggag
caggactacaggggggagccaggggaggagaaggagagtaaaaccatcatgctccggggc
ctgtctcttcacgtcacagagggagacatccgagctgccctggaccagctggagggaccc
cagccaatagatgtccggttgatgaagaagaggacaggtataagcagaggtttcgccttc
gtggagttttatcacttgcaagatgctacccgatggatggagaccaatcagaaactcctc
gtcatccaaggcaagagtgtggccatgcactacagcaacccccggcacaagtttgaagac
tggctctgcaacacttgcggcctgtacaatttccggaggaggctgaagtgcttcaggtgc
ggagcatccaaagctgagtgtgaaaccaacaccactggagtccgagagacccagcagagc
ggagactactacggcgacacgatcatccttaggaacatcgccccccttaccactgtggag
gccataatgactgccctggccccctacgccaacctgtcaaccagcaacatccgtctcatc
aaggacaaacagacgggccagaacagaggcttcaccttcgtacagctttcctcccctctg
gaggcttctcagctcctaactatcttacaaggactgcagccccctctcaagctggatggg
aagaccatcggtgtggactatgccaagagtgccaggaaggatctcttgctcccagactgt
aaccggatcagtgccttctctgtggccagcacagccatcgctgctgcccagtggtcctcc
agccagccacagcagggtgctgaaggacagctgtcggagtacagctacctagaggagggc
tacgttccctacacacaggactaccaggcctactaccagcaggcagcaggagacctctcc
caggggaacggaatactgggagcggccccagctactacaggagtggtgatctcacaggtt
gcacaggtctaccaaccccgcctaatcagtcacactgccacacaggcactgcaattggcc
cagcaactggaagcaaaacagaccggagttcactctgcagctgcaaccattacagcgccg
gtttccacagcaacagcgacactctctggactggccacagacactgctgttcccgacacc
tccacctaccagtatgacgagtcctcgggctactacttcgaccctgaaactggcctctac
tacgacccaaatacccattactactataattcccaaacacagcagtacctgtactgggac
agcgagaagcagacgtacgtccctgcctcagccgccgaccaaactgagcagacggcaaac
gcagcagcagctagcaaagaggctaaggaatccaaggagaggaaacaagagaagcccaag
agcaagacggctcaacagattgctaaggacatggagcgctgggcgaagagtctgaacaag
cagaaggagaacttcaaaagcagcttccagcccgtcagccaggaggagaggaaagaggcc
gcggccgccgacgcaggcttcacactcttcgagaagaagcaggctggaagcttggaaatg
ctcatgtcagaagcagtgcagcgcccagaggagcaggccccaaccaactcagccaaggtt
ggtctggtggcagcctacagtggggacagtgacccagaggaggggggtgcagcagagccg
gagcgcgatggtggtgagcagggccaggatcagctgacagactggaagaagatggcctgc
ctgctatgtaggagacagttccccaataaggacggcctggtgcgccaccagcagctctct
gaccttcacaagcaaaacctggaggtccaccgcagatctaagctgagtgaggctgagctg
gaagagctggagaggaaagagaccgagatgaagtacagagaccgggctgcggagaggaga
gagaaatacggcatccctgaacccccagcacccaaaaagaagaaattcacagcacagcca
gcaccagtcgttaactatgagcaacccaccaaagacggtctgaacagtgacaacattggg
aacaagatgctgcaggccatgggatggcaggaaggcagaggtctgggccgcaaccagcag
ggcatcactgcacctattgaggcccagctgagggcgaagggagctggtctgggaaccaaa
ggcagcagctacggcctgtctgcctcagacacttacaaagacgctgtccgcaaagccatg
tttgcccgcttcactgaaatggagtga
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