Oncorhynchus gorbuscha (pink salmon): 124031664
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Entry
124031664 CDS
T07892
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124031664
Spliceosome [BR:
ogo03041
]
Common components
Common spliceosomal components
General mRNP proteins
124031664
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
124031664
NCBI-ProteinID:
XP_046199144
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All DBs
Position
LG03:61814212..61846890
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AA seq
513 aa
AA seq
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MADDFDVEAMIEAPYKKDEIKSSSANGNEERSSKKKKRSHRRSSRSPSSDKCYSKDGKKS
PEKKRSRSKERRRSGSSSREHAGRYRGRQGPFWKRSRSHSPLKKDKSPVRKPIDNLTPEE
RDAHTVFCMQLAARIQPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFLDVNSVPL
AIGLTGQRLLGVPIIVQAPQAEKNRAAAMANNLQKGNAGPMRLYVGSLHFNITEDMLRGV
FESFGRIESIQLMNDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGHVTER
TDPSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSIHSTP
IYFNMAAGTDMQASLNPPPEAPATLSLNLAPSMNQAMTLSTQPLATHCLQLSNMFNPQLE
NEPGWDVEIQDDIIEECNKHGGIVHIYLDKNSPQGNVYMKCPTIPTAMAAVNALHGRWFA
GKMITAAFVPFPTYHNLFPDSVTAAQLLMPVRQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgactttgatgttgaggctatgatagaggctccatacaaaaaggatgaaatc
aagtcatctagtgctaatggaaatgaagagcgcagtagtaagaagaaaaagaggagccat
cgtaggagtagtcgcagcccgagctctgacaagtgctacagcaaagatgggaagaagagt
ccggagaagaaacgcagccgcagtaaagaacgccgacgcagtggttccagtagcagggaa
catgctggacgctacagaggacgccagggccccttttggaaacgctcaagaagtcatagc
cccttgaagaaagacaagagtccagtaaggaaaccaattgacaacctgaccccagaggag
agggatgcccacactgttttttgtatgcagctggcagccagaatccaaccacgagaccta
gaggacttcttctcagccgtggggaaagtgagagacgtgaggatgatctctgacagaaac
tccaggaggtcaaagggcattgcctacattgagtttctggatgtgaattcagtcccgctg
gctattggcttaactggtcagagacttctaggagtgcccatcatcgtacaggcccctcag
gctgagaagaacagagctgcagcaatggccaacaaccttcagaagggtaatgctggccct
atgcggctgtatgtgggctcgctacacttcaacatcacagaggacatgctgcgaggtgtc
ttcgagtctttcggaagaattgagagcatacaactgatgaatgacagtgaaactggacga
tccaaaggatatggtttcatctcgtttgcagatgcagagtgcgccaagaaggccctggag
cagctgaatggctttgagctggccgggcggcccatgaaggttggtcacgtgacggaacgc
accgacccctccaccgccagctccttcctggacaacgacgagctggagaggacaggcatt
gacctgggcactaccgggcgcctgcagctcatggcccggctggcagagggtactggtctt
cagatccccccggctgcacagcaggctctacagatgagtggttccatccactcgactcca
atctacttcaacatggcagctggtacagacatgcaagcgagcctgaacccaccccctgaa
gctcctgccaccctttcactgaatctggctccaagcatgaaccaggccatgaccctctca
acgcagccactggctacgcactgcctacagctgtccaacatgttcaaccctcagttggaa
aatgaacctggctgggatgtcgagattcaagatgacatcattgaggagtgcaacaaacac
ggtggaattgtccacatataccttgacaagaactctcctcagggcaacgtgtacatgaaa
tgcccgacaatcccaacagcaatggctgcagtgaatgcgctacatgggcggtggtttgct
ggtaaaatgatcactgcagcgttcgtaccttttccgacctaccataacctttttcctgat
tcggtaactgcagcccaattattgatgcctgtgcggcaatga
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