Oncorhynchus gorbuscha (pink salmon): 124031713
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Entry
124031713 CDS
T07892
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124031713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124031713
03036 Chromosome and associated proteins [BR:
ogo03036
]
124031713
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124031713
Coactivators
SAGA/TFTC/STAGA complex
124031713
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124031713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
VHS
Motif
Other DBs
NCBI-GeneID:
124031713
NCBI-ProteinID:
XP_046199258
LinkDB
All DBs
Position
LG03:65147014..65160151
Genome browser
AA seq
945 aa
AA seq
DB search
MAAGSDLLDDAFFNTEVDEKVVSDLVGSLESELTGSGRGNSAVRVQAAANHIGNPAICGK
SNVQDSKMGLSQELVKPGTSVQAGVINSTRSTMDTAAGTTAAAGSGMTAGHSQSKTGAAG
CVVKVVPDHGEGIGKTGSAGVQTLNGSSVVINSHNLVSSASSTVPAVTVVNNGPGSVVEG
NVILPTTSIQTSLMDSAVTSTVVSSQPSVLNSVPTVTLVRPPMHTTRAVTSPSGSNNFLT
SSVNVAHPACSGAQINKSEPKTAIQKAAQMTGTAAAVAKSPSTIAISPGGIRAIAPQVLA
PRLPQPQQNAPNIQNIQLPPGMVLVRSESGQLLMIHQQTLAQMQAQSQSPMTPRPATPTS
TPPVQITSVQAPGMPLMARQVTPTTIIKQGTPAQTTVLQRPPVLQQNTIVLGGAAATPGQ
APVQPGSAATAAVNQRAGTPGATGTPGTPATTMETLENVKKCKNFLSTLIKLASSGKQSS
ETTASVKDLVKSLLEGKIEAEEFTSRLYRELNSSPQPYLVPFLKRSLPALRQMTPDSTAF
IQQSQLPQASVQPASSSTALTTVALGGTAAAQRLPLNRTTSPGAKGTMHQSPVISPALTP
HSKPGLMVPQQQGALASTQVTLAQSPMVTFRGQSHSRIIMGHPQVVKQLQTVPVVKQALA
PGAKVTLGRQSMLSVAQTNKLKEASGGTFKDDDDINDVASMAGVNLSEESARILATNSEL
VGAVTRSCKDEAFLHTTSLTRRVQEIGRRFGVIDLGPEVVNYVSHATQQRLQNLLEKVTE
VAQQKNITFKEDDKYEQVSDVRAQLKFYEQLDQMEKQRKEEQEREILMKAAKSRSRQEDP
EQLRLKQKAKEMQQQELNQIRQKEANMTALAAIGPRKKRKMESPVNGAGAEGSGSGPSSS
GGANSGGSRPQRQRITRVNLRDLLFCLENERETSSSHLLYKGFLK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatttgctggatgatgcctttttcaacactgaggtggacgagaaa
gtagttagtgatctagttggatctttggagtctgagctcacgggatcgggtcgcggaaac
tctgcagtcagggtccaggctgccgcaaatcacattggcaaccccgctatatgtggcaaa
tccaatgtccaggacagcaaaatgggactttcacaagagcttgttaaaccagggactagc
gtccaagcgggtgtcattaatagtacgaggtccaccatggatacagcggccgggacgacg
gcggcggcgggctcaggcatgacagcgggacacagtcagagtaagactggggcagccggt
tgtgtggtaaaagtggttcccgatcacggggaaggaatcgggaaaaccgggtcggccggt
gtacaaactttaaatggaagtagcgttgtaataaactctcataatttggtgagctctgca
agcagcacggtgcccgccgtcacagttgtcaacaacggaccaggctccgtggtcgaagga
aacgtaatcttacccacaacttccattcaaacctctctaatggacagtgctgtcacttca
actgtagtatcgtctcagccgtctgttctaaacagtgtgcccactgtcacgctcgtaagg
ccgcctatgcacaccaccagagcagtcacctcgccgagcgggagcaataactttctgaca
tcatctgtcaacgtcgctcaccctgcatgttcaggagcacaaatcaacaagtcggagcca
aaaacggcaatacaaaaggccgcacagatgacggggacggcagcagctgtagcgaaaagc
ccatcgactattgcaatcagtcctggtgggataagggcgatcgctcctcaggtattggcc
ccaagacttccgcagccccaacagaatgctccaaacatccaaaacattcagctcccccca
gggatggtgttggtgcgcagtgagagtgggcagctgttaatgatccaccagcagaccctg
gcccagatgcaggctcagtcccagagccccatgaccccacggccagccacccccaccagc
acgccccctgtccagatcacctctgtacaggctccagggatgcccctcatggcccgtcag
gtgacccccaccaccatcatcaagcagggcaccccggcccagactactgtcctccagagg
cctcctgtgctacagcagaacaccattgtgctgggtggggcagctgccaccccaggtcag
gccccagtgcagcctggctcggcagcaacagcagcagtcaaccagcgagcagggaccccc
ggcgctaccgggacaccaggcactcccgctaccactatggagaccctggagaatgtgaag
aaatgcaagaacttcctttccacgctgatcaagctggcatccagcgggaagcagtcgtca
gagaccacggccagcgtcaaggacctggtcaagagcctgttggaaggtaagatcgaagcg
gaggagttcaccagtcggttatatcgggagctcaactcctctcctcagccatatcttgtg
cctttcctcaagaggagtctccctgcactgcgtcaaatgaccccagactcgacagccttc
atccagcagagccagcttccccaggccagcgttcagcctgcctcctcctccacagccctg
actacagtggcgctggggggcacggccgccgcacagagactccctcttaacagaaccacc
agccccggggccaaggggaccatgcaccagtcccctgtcatcagcccagccctgacacct
cacagcaagcctggcctgatggtgccccagcagcagggggcgttggcgagtactcaggta
actctggcccagtcgcccatggttactttccgaggccagtcccacagtcgcatcatcatg
ggacatccgcaggtggtcaaacagctgcaaacagttcctgtagtgaaacaagctctagca
ccaggggccaaggtaacactggggcgccagtctatgctctctgttgcacagacgaacaag
ctgaaggaggcaagcggaggaaccttcaaagatgatgatgatatcaatgacgtggcatcc
atggctggagtcaacctgtcagaggagagcgcccgtatactggcaaccaactctgagctg
gtgggcgcggtgactcgctcctgtaaggacgaggccttcctccacaccacctcactaacc
cggagagtacaggagatcggtaggaggtttggggtgattgacctggggccagaggttgtc
aactacgtttcccatgcaacacagcagcggctgcagaacctgctggagaaagtgacggag
gtggcgcagcagaaaaacatcaccttcaaggaggatgataagtatgaacaggtgagtgac
gtgcgagcccagctgaagttctatgagcagctggatcagatggagaaacagaggaaggag
gagcaggagagggagatcctgatgaaggctgccaagtctcgatcgcggcaagaggaccca
gagcagcttcggctcaaacagaaggccaaagagatgcagcagcaggagctgaatcagatc
aggcagaaggaggccaacatgacagccctggcagccatcggccccaggaagaaacggaaa
atggagtcccccgtcaacggcgctggggctgagggttctggctctggtccctcgtcgtcg
ggtggggccaatagtggaggctccagacctcagcgccagcgcatcaccagggtcaacctc
agggacctgctcttctgtctggagaatgagagagaaaccagtagctcacatctactctac
aaaggcttcctcaaataa
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