Oncorhynchus gorbuscha (pink salmon): 124031752
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Entry
124031752 CDS
T07892
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124031752
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124031752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124031752
Spliceosome [BR:
ogo03041
]
Common components
Common spliceosomal components
SR proteins
124031752
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124031752
NCBI-ProteinID:
XP_046199334
LinkDB
All DBs
Position
LG03:67317588..67321478
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AA seq
336 aa
AA seq
DB search
MPRVYVGKLSYHAREKDLQRFFNGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYSGGGGGRSSSGYSSSSRSRTGRDKYGPPVRTEYRLIVENL
SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDMRRALDKLDGTDINGRKIR
LVEEKSRRRRSYSGSRSRSRSRRRSRSRSSRSRSNSRSRSHSRSKRRRSRSGRKSRSCKS
RSRSRTHKSRSRSDKSKSRSKSRSKVKSERDSSSPSKEKLTSKKSRSRSASPMGNGKEEP
SSRSPSPAADRHSKSPDKRPVSRSPSRSRSRSASRD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgtctatgttggaaaactaagttatcatgctcgagaaaaagaccttcagcgg
tttttcaatggctacggaaagcttatggaaattgatctgaaaaatggatatggatttgta
gagtttgaggacaatcgcgatgcggatgacgctgtgtatgaactgaatggcaaggagttg
tgcggggagcgtgtgaccgtggaacatgcaagaggaccgcggcgcgaccgagatggatat
agtggtggcgggggtggtcgcagtagtagtggttacagcagcagcagcagaagccgcact
ggcagggataagtacgggccacctgtccgtaccgagtaccggctgatcgttgagaatctg
tccagccgctgcagctggcaggatctgaaggatttcatgcgccaggctggagaggtcacg
tacgctgacgcccacaaggagcgtaccaacgagggtgtcatcgagttcggctcacgttcg
gacatgaggagggccctggacaagctggacggcacagacatcaacgggaggaagatccgc
ctggtggaggaaaagtctcgccgccgccgctcctactctggcagccgctccaggtctcgc
agcagacgtcgctctcgtagcaggagcagccgctccaggagtaactccaggtcccgatcc
cattctcgcagcaagagacgtcgctctagatccggaaggaagtcccgttcctgcaagtct
cgttcccgctctcgcacccacaaatccagatcccgctccgacaaaagcaagtcccgttcc
aagagccgttccaaggtgaaatccgagcgggattccagcagcccctcaaaggagaagttg
accagcaagaagtcacgtagccgctcggcgtcccccatggggaatgggaaggaggagccg
tcctctcgctccccgtccccagcagctgaccgccactccaagtctccagacaagcgtcct
gtctcccgctccccatctcgctccaggtctagatcagcttcccgagattag
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