Oncorhynchus gorbuscha (pink salmon): 124031860
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Entry
124031860 CDS
T07892
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124031860 (rtel1)
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124031860 (rtel1)
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124031860 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
124031860
NCBI-ProteinID:
XP_046199589
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All DBs
Position
LG03:complement(72806807..72868007)
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AA seq
1216 aa
AA seq
DB search
MPPLTLKGINVDFPFTPYECQKDYMSKVIECLQNKVNGVLESPTGTGKTLCLLCATLAWK
DYFKDTISARKIAEKMGGAELFPNTPLASWGTTATDGDTTTYYTDIPKIIYASRTHSQLT
QVINELKNTSYRPKVCVLGSREQLCINPEVMRQESNHLKVHMCRQKISTRSCVFYNNVEE
KSMDKDLVNSILDVEDLVKAGNKQRVCPYYLSRSLKQQAEIIFMPYNYLLDPKSRRAHNI
ELKGAVVIFDEAHNVEKMCEESTSFDLTPYDLASAIDAVDKLLAEQAKEAGRGDVSEDFN
MESINGGLKLDITTIAKIKQILLDLEAAIDSYDVPDKGITKPGSFIYELFQTAHLTFDTR
TPIFEALEQITGYLAGKPGIFMNTTGLQKLADIIQLVFCVDTQEGNKGANMPLNMQSSTT
KFKVHIHKDTSHHKKKQNTDVWSSSSSKKQGNVLSYWCFSPGFSMQELVRQGVRSIILTS
GTLSPLSSFTSEMEIPFPVCLENPHVIQHDQIFVSIIDRGPDSVQLSSAFDRRFVPENMA
SLGNTVVNLGRVVPHGLLVFFPSYPVMDKTLEFWRANGHADRIENIKPMFVEPRGKGTFT
EIIDGYYDKVNDSKSKGGSFFAVCRGKASEGLDFADTYGRGVIITGLPFPPRMDPRVILK
MQYLDEMCRKKTPGVQYLSGQNWYRQQASRAVNQAIGRVIRHRDDYGAIFLCDHRFKSTD
ARAQLPSWIRPYVRTYDNFGNVVRDVAQFFRVAQKHRPPPEKKPAKGSCGGAVHSADAQC
VSAGPCHSSESSTKGGFAQKAKVLDSHVPSLKRRRLNEHGGSEGNGMARLCIEYETEMEV
SRRRPAGLLDALEHSDSRYGDEVVEALGGEERANRISTLSLQYDKRMDDELRGGKRKIKV
VQERKIPLSPNVSEEGKAGKAKSFLTEMKKSLSQVNFQRIMAALQTYKQMDDLDKLLAEA
ADLFTGDTNTYNLLRGFYQFIRPHHKKRFDEKCVELTGQGCGYKPDHSLSKEEKETLMQN
GAKPGKLTSVASDSSSSCSQLNASLLLNKGGHHLGIHGLTTEEHLPKNKVLTVDDPKCEG
QAPVQSAQKSQIYASFIADVKKSIGLEKSNQLFSAIQSYKKTDNYDSLVGTVVSLLTEKT
KTLTSLAVTFALFIRPHHKKQYKEMLDALIGDSTGSSASSGISGQLIKGECTILKCLQER
ITCSNSGEVLVLSALL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctgactttgaaagggataaatgtggatttccctttcaccccatacgaatgt
cagaaggattatatgagcaaggtgattgagtgtctacaaaacaaggtaaatggggttctg
gagagtccgacaggcacgggcaaaaccctatgccttctgtgtgccacccttgcctggaag
gactacttcaaagacaccatttctgccaggaagatagcagaaaaaatgggaggagcagag
cttttccccaacacaccattggcatcgtgggggaccactgcaacagatggagacacaaca
acttattatactgatattccaaagatcatttatgcatccaggacacattctcagctgacc
caggtcattaatgagttaaagaacacttcctacaggcccaaagtgtgcgtgttaggatcc
agggagcagctttgtattaacccggaggtgatgcgtcaggagagcaaccaccttaaggtt
cacatgtgtaggcaaaagatatccaccaggtcttgcgtcttctacaacaatgttgaagag
aagagcatggataaagacctggtgaactccattttggatgttgaagatctggtgaaagct
ggcaacaagcaaagggtctgcccatactacctctcacgttccttgaaacagcaggcagaa
atcatattcatgccttacaactatctcctggacccaaagagtcgcagggcgcacaacatc
gagttgaaaggggcagtggtcattttcgacgaagcgcataacgtggaaaagatgtgtgag
gagtccacatcctttgacctcactccctacgacctggcatcagctattgatgctgtggac
aagctgctagcggagcaggccaaagaggccgggcgaggagacgtctcagaggacttcaat
atggaatccataaatgggggtttgaaattggacataaccaccattgctaaaataaaacag
atacttctcgatctggaggcggccattgattcttacgacgtgccggacaaggggatcacc
aaacctggaagcttcatctacgagttgttccaaacggctcacctcacatttgacacaagg
acgcccatctttgaagccctggagcagatcactggatatctggctggaaaaccaggcata
ttcatgaacacaactggattacagaagttggcggacataattcagctggtgttctgcgtt
gatacacaagagggcaacaaaggtgcaaacatgccgctcaacatgcaatccagcaccact
aaatttaaggtccatatccataaagacaccagccatcataagaaaaaacaaaatactgat
gtgtggtcttcatcttcctccaaaaaacaaggaaatgttctgagttactggtgcttctcg
cctgggttcagcatgcaggagctggtgaggcagggcgtgcgcagcatcatcctcaccagc
gggaccctctcccctctgtcctcatttacctccgaaatggaaattccctttccagtatgc
ctggagaacccccatgtgattcagcatgatcagatctttgtcagcataattgaccgcggt
ccagacagcgtgcagctcagctcagcatttgaccgcaggtttgtccctgaaaacatggca
tctttagggaacactgttgtgaatctgggccgcgttgtccctcacggtttgctggtgttc
ttcccctcttaccctgtgatggacaagactctggagttctggagggcaaacgggcatgcc
gaccgcattgaaaacataaagcccatgtttgtggagcccaggggaaaggggacgttcacg
gagataattgatggttattatgacaaagtcaatgactcgaaatctaaagggggcagcttc
tttgcggtctgtcggggaaaggccagcgagggcctggattttgctgacacgtatggccga
ggggtcataatcactggcctcccgttcccgccccgcatggacccccgggtcattctgaag
atgcagtacctggacgagatgtgcaggaagaagacccccggggtgcagtacctgtcgggg
cagaactggtatagacagcaggcgtccagggcagtgaaccaagctattggaagagtcatt
cgccaccgtgatgactacggggctatcttcttgtgcgaccacaggttcaaaagcacagac
gcacgtgcccagctaccctcatggataaggccctacgtgcgcacttacgacaactttgga
aatgtggtccgtgacgtggcgcagttcttcagagttgcacagaaacataggcctcctcca
gagaagaagcctgcaaaggggagttgtggtggggcggtacactctgcagatgcccagtgt
gtcagcgccggaccctgccactcctccgagagctccaccaagggaggtttcgcccagaag
gccaaagtactggactcccacgtgcccagtctgaagaggcgacggctgaatgagcatggc
ggcagtgaggggaacggcatggctaggctgtgcatcgaatacgaaacggagatggaggtg
agccggaggaggccggccggcctgctagacgccctggagcacagcgacagccgctatgga
gatgaagtcgtcgaggccctagggggcgaggagagggctaatcgcatatccacgctgtct
cttcagtacgacaagcgtatggatgacgaattgcgtggtggaaaacgaaaaatcaaagtc
gtccaagaacggaaaatccctctgtctcctaatgtgtcagaggagggcaaagcggggaaa
gccaagtcgttcctgacggaaatgaaaaagtcgctgagtcaggtgaatttccagcgaata
atggcggccctgcagacgtacaaacagatggatgaccttgacaaactgctggccgaggca
gccgacctcttcaccggggacacaaacacctacaacctgctccgaggattctaccagttc
atacgaccccaccacaagaagagatttgatgagaagtgtgtggagctgactggccagggc
tgtggctacaaacccgatcactcgctctccaaggaggagaaagaaacgctgatgcagaac
ggggccaagccgggaaagctgacgagtgttgcttctgattcaagctcctcctgcagtcag
ctcaacgccagtctgctgcttaataaaggtggccatcaccttggaatccacggattgact
acagaggagcatttgccaaagaataaagtgcttacagttgatgatcctaaatgcgaaggc
caagcaccagtccagtctgctcagaagagtcaaatctacgccagtttcatagcggatgtg
aaaaaatccattggacttgagaagtccaaccaactgttctcagctattcagagctataag
aagaccgacaactatgatagcctggtgggcacagtagtgagtttgttaactgagaaaacg
aagactttaacctccttagcagtaacatttgccctgttcattcggcctcaccataagaaa
cagtacaaagagatgctggatgccttgataggtgactccacaggctcaagtgcttcctct
gggatttcaggccaactaataaaaggtgaatgtacaattctcaagtgccttcaagagaga
ataacttgtagcaattcaggagaagtccttgtattgtcagcactattgtaa
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