Oncorhynchus gorbuscha (pink salmon): 124031895
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Entry
124031895 CDS
T07892
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00310
Lysine degradation
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124031895 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124031895 (prdm2a)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124031895 (prdm2a)
Enzymes [BR:
ogo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
124031895 (prdm2a)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124031895 (prdm2a)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124031895 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_2
zf-C2H2_jaz
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
124031895
NCBI-ProteinID:
XP_046199643
LinkDB
All DBs
Position
LG03:complement(74442009..74461713)
Genome browser
AA seq
1477 aa
AA seq
DB search
MEDSHTLYISELGNDDNLEEEMEDKELEETHCSLYLMSMETDELADSNTSCQKPEAKGCD
LKPDLGSVSHSATPELPEDPDHDPDVELQDSFPCQFCERNFTSKQGLERHIHIHTLANHH
THIFKCKYCSKSFGSKIGRRRHERRHENAKARPGSLIKPVEPPSSALQRNGPECVSSPSS
SSASVLADREQVSTSDEHGELQGGHTCKYCKKVFSTHTNMRRHQRRIHERHLRLKGKEAP
LLQEAKHLKLPPIKSQQDTNKASPVAVLEIESDQEEQYMLDISGNISENLSFYIDGKIVS
TSTVSGCEVVEVNSGSATLVGLNAVIINPAQISQALKVETATHTGKGIPGQPLTKRRTAT
PPLLPQIKTELESEVLSSSSSSIVSSLIESLIPQNTESTILHRERTVYLSPKLKQLLQMQ
DCLKPSFALITEGQKLCSPLSLTVLPAGLGRFKRRTGSPPNSPQQSPMSNVESTTTDVGV
SIAVNAPTSESQCSSPACSLSSNDESEISNSPPVNDAITTRVLPEGWSPMSGGCSCNQQP
LDLSNAVKKSEDEALREAVLDLSVHRKSADSEVKRILVPQPLNKKRKPNTSMLEKVLMNE
YANLEVAAEQELSILENHDAPLVTDFAIVTASDMSPATEGEVFGLTFPSAALSPSPSSLA
SVPRQSISPCTIALASPSPHPILPTAPSLITVLAPPTSSSSNSTNQPILQVLASKISPNP
LIICTEDSLNSAECEWRAALPDWATSNSASQLAISKPLDPTLNLQGHVFLTDHTLNQIAL
NTTTVESNIGFEVPTCSPALTLNDSIINSFDITSNTVLIECTVALETPENLVPTTIDFQE
NNFESTAPAQIVINQQQPLSLPHETVDPSILVSSLEQSVTLSTLSAVISECPTRQESISS
PVPSIIKTESNQKAVSEDISICPSKTPPHSEGTSQVEESSNETLSKLQETFTKEFICNVC
DKLFHSMKELGHHVSEHSDEWPYKCEFCVLLFGKPTALLDHRSTLHGVGKSYVCCACTKE
FAYLCNLKHHQKELHPGQECKYTEEENGKLRPQNYNNATKGSTEALSYCAMAESNKPVIK
DEGELDDATEELFTTIKIMASEGGKPKGLDVCLGINQHYPSFKPPPFPYHNRTPVGSVAS
ATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPNKNPIPLRHF
AKAQNGVLSSTNSTNGQNALHTASQTNRPKLNQEPPAKLKLNALNKRKKQLVQRAISQRS
KSTSLTKRTSSLVDEQEIYVCPHCIREFTYRRSRTKHMAVCPRKPAAKEAKKRKDGSISY
TKENNGHLHREVLHLEEKSDHEQKSRAHSSSPTKRTAILPAHKVLSNKKSKAIIAMASVQ
TPQEAPKLTALSLVHPFNSRQRQGSRMHHGVKEIRSNITMVKSHQQPPQVDEHPCSQSGR
VRGPVTRSLQQIVVIDSAKEEQLTSQEPPGDLQDPSI
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctcacactttatacatctcagagttgggaaacgatgacaatttagaggag
gagatggaggataaggagcttgaggaaactcactgcagtctttatttaatgtccatggaa
acggatgagctggcagattcaaacacaagttgccaaaaacctgaggccaaaggctgtgac
ctgaagccggatttaggatcggtctcccattcagcaacccctgagctcccagaggatcct
gaccatgaccctgatgtagagctccaggactcatttccctgtcaattctgtgaaagaaat
tttaccagcaagcaaggcttagaacgtcacatacacatccacaccttagctaaccaccac
acacacatatttaagtgtaagtactgcagcaagtcctttggctcaaaaattggccggcga
cggcatgagaggagacatgaaaatgcaaaggcaaggcctggatctttaataaagcctgtg
gagcctccaagttctgccctacagcgcaacggtccagaatgtgtgtcttctcccagtagc
tccagtgcctctgttttggcagacagagaacaggtgtctacgtcagatgaacatggagaa
ttacagggtggtcacacttgcaagtattgcaaaaaggtttttagcacgcatacaaacatg
cgacgacatcagcgcaggatccacgagcgccatcttcggctcaaaggtaaggaagcccca
ctgttgcaggaagcaaaacatctaaagctaccccctattaaatctcaacaggataccaac
aaagcaagcccagtagcagttcttgagatcgaaagtgaccaagaggagcaatatatgctg
gatatctctggtaacatctctgagaacctcagcttttatatagatgggaagattgtatca
acaagcactgtcagcggctgtgaggtagttgaagttaactctggatctgctactttagtc
ggactaaatgctgtgattattaatcctgcccagatcagtcaggctcttaaagtagagacg
gctactcacacaggaaaagggatacctggtcaacccttgacaaaaagaagaactgccaca
ccacctcttctaccccaaatcaaaacggaactagaatcggaagttttgtcctcttcttca
tcatcaattgtgtcatctttgatagaaagtctcattcctcagaacacagagtctactatc
cttcatagagagagaacagtttatctgtcacctaagctgaaacagctcttacagatgcaa
gattgcctcaaacccagctttgccctgatcacagaaggccagaagctgtgttcaccactt
tccctgactgtcctcccagcaggattggggaggtttaaaagaaggaccggatctccccca
aactcaccacaacaaagccctatgtcgaatgttgaaagcacaacaaccgatgtgggtgtt
tctattgctgtcaatgccccaacgtcagagagccaatgcagttcacccgcatgcagttta
tccagcaatgatgagagtgagatctccaacagtccaccagtaaacgatgcaataacaact
cgtgtcttgccagagggatggtccccaatgagtgggggttgttcctgcaaccagcaacct
ttggacctctcaaatgctgtcaagaaaagtgaagacgaagccctgcgggaagctgtgttg
gacttgagtgtgcacagaaagagtgcagattcggaagtaaagagaattttagttccacag
cccttaaataaaaagaggaagccaaacaccagcatgttggagaaggtgctgatgaatgag
tacgcaaacctagaggttgctgcagagcaagaattaagtatattagaaaatcatgatgca
ccgttagttacagactttgccatagttactgcttcggatatgtcacctgctactgaaggc
gaggtgttcggattaacttttccctctgcagcacttagtccatccccttcctctctagct
tcagtccccaggcaatcgatctcaccatgcaccatagcacttgcttccccatctccacat
ccaatcttacccactgctccgtcactaattactgttttagcaccaccaacatcttcctct
agcaattccacaaatcaacctatccttcaagtattggcctctaaaatatctcctaatcct
ttaataatctgcacagaagattcattgaattcagctgagtgtgagtggagagctgctttg
ccagattgggctacctctaattctgcaagccaacttgccatctctaaaccccttgaccca
actctcaatctacaagggcatgtgtttctcacagatcacactttaaatcaaatagctctg
aacactaccacagttgaatccaacattggatttgaagtgccaacatgctctccagcttta
actctaaacgattccattatcaactcctttgacattactagtaatactgttttaattgaa
tgcacagttgctcttgaaaccccagagaaccttgtccctaccacaattgatttccaagag
aataattttgaatccacagcacctgcgcaaattgtcataaatcagcagcagcctctgtcc
ttgcctcatgaaaccgttgacccttctattttagtatcttctttagagcaatcggttacc
ctttcaacgctgtctgcagtcatatctgaatgtccaactcgtcaagaatccatttcctcc
cctgttccttccattattaaaacggaatcaaaccaaaaggcagtatcggaggacatatct
atctgcccctctaaaacgccacctcactctgagggcacaagtcaagtggaagaatcctca
aatgagaccctctccaagctacaagagactttcactaaggaattcatatgcaatgtatgt
gataagctttttcattcaatgaaggaactgggtcatcatgtaagtgagcattctgatgaa
tggccatacaaatgtgagttctgtgtgctactctttggaaagcccacggcattgcttgat
cacaggtcaaccctccatggcgtcggcaagagctatgtttgctgcgcatgtacaaaggaa
tttgcttatctttgcaacctgaaacatcatcaaaaggagttgcaccctggccaggaatgc
aaatacacagaagaagaaaatggcaagctacgaccccagaactataacaatgcaacaaaa
ggtagcacagaggctttgtcctactgtgccatggcggagtccaataaaccggtcataaaa
gatgagggagaattagatgacgctactgaggaactctttaccacaataaagataatggct
tctgagggaggcaaacccaaaggcctggatgtttgccttggcatcaaccaacactatccc
agttttaagccgcctccgtttccatatcacaaccggacacctgttggctctgtagcctca
gctaccaacttcaccacccacaacatcccacaaaccttcagcactgctatccgatgcact
aaatgtggcaaaagctttgataacatgccagagctgcacaaacacattcttgcctgtgca
aatgccagtgacaaaagacgctacacacccaataagaaccccattcctcttcgtcacttt
gcaaaagcccaaaatggagtactgtcctctactaattccacaaatggccaaaatgctcta
cacacggcaagtcaaacaaatcgtcccaaactcaatcaggagccacctgccaagttgaag
cttaatgcactcaacaaaaggaaaaaacagctggtacaaagggccatttcacagaggagt
aagtccacctctttgacaaagagaacctcttctctagtcgatgagcaagagatctatgtc
tgtccgcattgcattagagaattcacataccgccgcagccggaccaagcacatggccgtc
tgccccaggaaacctgcagccaaagaggccaagaaaagaaaagatggcagtatctcttac
actaaggaaaataacggccaccttcacagagaagtccttcatttggaagagaaatctgat
catgaacagaaaagcagagcccatagttcaagtccaacaaagaggacagccatattacca
gctcataaagtcctgtcaaacaaaaaaagcaaagccatcattgcaatggcaagtgtccaa
acaccgcaggaggcacccaaactgactgcactgtctcttgttcaccctttcaactcccga
caacgtcaaggcagtaggatgcaccatggtgttaaggaaattcgttctaacattacaatg
gtgaaatcccaccaacaaccaccacaggtggatgagcacccctgcagtcagagtggaagg
gtgaggggaccagtgacccgcagtctacagcagattgtcgtcatagattcagcaaaggaa
gaacagctgaccagtcaggagccaccaggggatctgcaggatccttcaatttga
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integrated database retrieval system
