Oncorhynchus gorbuscha (pink salmon): 124031961
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Entry
124031961 CDS
T07892
Name
(RefSeq) contactin-4-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124031961
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ogo00537
]
124031961
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Contactins
124031961
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ogo00537
]
Others
124031961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
Tissue_fac
Herpes_gE_N
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
124031961
NCBI-ProteinID:
XP_046199785
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Position
LG03:complement(78561194..78614302)
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AA seq
844 aa
AA seq
DB search
MQDTRRFVSQKTGNLYIAMVEPSDVGNYTCVVTNTVTKSSIQGPPTPLVLRVDGVMGEYE
PKIEIQLPDVIPVAKSSTVKLECFALGNPVPTISWRRVDGVAVGRKVDVNKASGVLEIPY
FQQEDAGLYECVAENSKGRNSVKGKLSFYAPPHLIEEPRDAQKPIDDTLVWECKASAKPK
SSYRWLKNGEPLDTMEMENRVSLFQDRVQVNNGVLTISSLKLADIGMYQCVAENKHGRVF
TNTELRVIAVAPDFSQNMLKPQTLARQGGDVLIECRPKMSPHGMISWRKGKEALRESHRV
SVLDNGSLRIANVTKMDVGLYTCVARNQFGVASSAGSLLVKETTIITSPAGHLDVTVGES
IVLPCQVSHDPTLDLKFTWFFNEQLIHFGNHGGYFEKVGGRSAGDIMIRNIQLRHAGKYT
CAVQTKVDSVSIATDVVVRGAPGPPVEFQVTEMTDSTASLSWGPGPDNHSPVLTHNIQAR
TTFSLGWQGVITVPELLGGKQLTATVIDLSPWVEYEFRVLATNAIGTGEPSKPSKKARTK
DMPPKITPSRVNGGGGGRSELVITWEPVPEELQSGPGFGYVVAFRPQGAQGWMQAAVTSP
DASRYIFKNESIAPFSPFHVKVGVYNNKGEGPFGPVATIYSAEEEPSRAPGRVRARSVSA
SEVEATWKALPWSNNRRRILGYELRYWGERERQETASVIRTMGNRTSVVIRGLEGSRTYF
ISLRAYNSAGVGPHCATVNVTTKKPPPSQAPVKIIWNTSNSKVILKWDHVRALENESEVT
GYKVMYTQDRHSRPNVVETNTTSLELALPVNEDYVIQIKPFSEGGEGSSSRQITIPRIAA
RTFL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacactcgtcgctttgtatctcaaaagacgggtaacctgtacattgccatggtg
gagccatcagacgtgggcaattacacctgtgtggtgaccaacacagtcaccaaaagtagc
attcaaggcccccccacccctttagtgctacgtgttgatggtgtaatgggtgaatatgag
ccaaagattgaaatccagcttcccgacgtcatacctgtggccaagagttccactgtcaaa
ctggagtgttttgcactgggaaacccagttccaaccattagctggagaagagtggatggg
gtagcagttggacgaaaggtggacgtgaacaaggccagcggagtgctcgagatcccctac
ttccagcaggaagatgcaggcctgtacgaatgtgttgctgaaaactccaaagggaggaac
tcggttaaaggaaagctctctttctatgctccccctcacctgatcgaggagcctcgggat
gctcagaagccaatcgatgacaccctggtgtgggagtgcaaggctagtgccaagccgaag
tcctcttaccgatggctgaaaaacggcgagcctctggacacaatggagatggaaaaccgg
gtgtctctttttcaggacagagtgcaagtgaacaacggagtcctgacaatcagcagcttg
aagctggccgacattgggatgtaccagtgtgttgcagagaataaacatggtcgggtcttc
accaacactgaactccgagttatagctgtagccccagatttctcccagaacatgctgaag
cctcagaccctggccaggcaggggggtgatgtgctgattgagtgcaggcctaagatgtct
ccacatgggatgatctcctggaggaaggggaaagaagcactccgagagagccacagagtc
tcagtgttggacaatggaagtcttcgaatagcaaacgttaccaaaatggatgtcggcctc
tacacctgcgtggcaaggaaccagtttggagtggcaagcagtgctgggagtcttttggtt
aaagagaccaccattatcaccagcccagctgggcatttggatgtgacagtgggcgagagc
atcgtcctcccctgccaagtctcccatgaccccacgctcgatttgaaattcacctggttc
ttcaacgaacagctcatccactttggaaaccacgggggctactttgagaaagttggcgga
cgctcagcaggtgacatcatgatccgtaacattcagctgaggcatgctgggaagtatacc
tgtgctgtccagaccaaggtggacagtgtttccatcgccaccgatgtggtagttagaggt
gctccaggcccacctgtggaattccaggtgacagagatgacagacagcacagcgtctctc
tcctggggaccgggtcctgacaaccacagcccagtcctcacccacaacatccaggcccgc
acaacattttcactgggctggcagggagtcatcacagttcctgaacttcttgggggcaaa
cagctgacagccactgtcattgacctcagtccgtgggtggagtatgagttcagagtgctg
gcaaccaacgccatcggaacaggagagcccagcaaaccttccaaaaaagcccggaccaaa
gacatgcctcccaagataacgccatccagagtgaacggaggtggtggtggtcgctcggag
cttgtcatcacttgggagcctgtccctgaagagctacagagtggcccaggatttggctat
gtggtagctttccgacctcagggggctcaaggctggatgcaggcagcagtcacctccccc
gacgcctccagatacatcttcaagaacgagagcatcgctcccttctctccgtttcatgtg
aaagtgggcgtgtacaataacaaaggggagggcccctttgggccggtggccaccatctac
tctgcagaggaagagcccagcagagccccgggtagggtgcgggccaggagtgtgtcggca
tcggaggtagaggccacctggaaggccctgccctggagcaacaataggagacgcatcctg
ggctacgagctgaggtactggggtgagagggagagacaggagacagccagtgtgatcagg
accatgggtaaccggacgtctgtggtgatcagaggcctggagggcagcagaacctacttt
atctccctccgagcgtacaacagtgctggggtgggccctcactgtgccacagtcaatgtc
accaccaagaaaccccccccaagccaggcaccggtgaagatcatatggaacacctcaaac
tcgaaggtcatcctcaaatgggatcatgttagagctctggagaacgagtccgaggtcact
ggttacaaagtgatgtacacacaggacagacacagtcgtcccaacgtggtcgaaaccaac
accacgtctctggagctggcgctaccggtcaacgaggactatgtcatccagatcaaaccc
ttcagcgagggaggagaggggagtagcagcagacaaatcactattcccaggatagcagcc
aggacgttcctatga
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