Oncorhynchus gorbuscha (pink salmon): 124031976
Help
Entry
124031976 CDS
T07892
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124031976 (ube4b)
04120 Ubiquitin mediated proteolysis
124031976 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124031976 (ube4b)
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124031976 (ube4b)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
U-box type E3
124031976 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
124031976
NCBI-ProteinID:
XP_046199817
LinkDB
All DBs
Position
LG03:complement(79618296..79660130)
Genome browser
AA seq
1377 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPWPLPGTSGATPQPLPPAA
SHSLGLNVQSVTPATSPIGASGVTYCSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSSMSQVDVDSGIENMEVEDSDRREKRDLAEKESAENSDVSEEQALQLICKILRV
SWKEQDRDVIFLPLLAAEFHQSSLKDVFSDFKDLIGQILMEVLLMSTQLHVHNPFASLTA
TSEPIAAAKSLDHHLTLIQPSSQGSSPMAPCAGSFGASSLSSLYGCSPHSLALNAARMIS
PPLPTPTSPSLHPMVAPSPPSMAYPPRLSLNLPSAPLPISQRYRPYSVTSPLGISTPPSP
RLASLPGLSRGPITEGLPVPPITLAPAPPLPTSPQLVPLPSTSPHPPTSMPLPLVPPSPR
SAARGAALATRIPSSPLSLLFFALSDMSQDSSEEEPEDEQEEDFTQVQFGSSLGVSGGGM
AWESCGDRFTIEACKETEMLNYLIERFDSVGMEEKKAPKICSHPSVSQLLSNIRSQCISH
AVLVLQGALTQPRSTLQQSLLVPYMLCRNLPYGFIQELARITYQEDEVFRQIFVPILQGL
GLAVKECSFDSDNFKFPLMALAELCEIKFVKTHPMCNLMTSLPLWCPKSLSPGTGREVQR
LSFLGAFFSLSVFAEDDSKVGDKYFSGPAITTENTRVVSQSLQHYLESARGEMFKILHNI
LLNGETREVALNYMAALVNRNVKKAQMQTDDKLVSTDGFMINFLSVLQQLSMKIKLETVD
PYYIFHPHCRLHVSPEETRLKATMEELKIWLAEMYNDPSKFSEPKFPTECFFLTLHTHHL
SILPGCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRSK
ACADAGLLDENLLRRCLQFYSMVIQLILRMVDPAYPHMSLPLNPEIPKSFAALPEFYIED
VAEFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQL
RTQRFSEMMENHPLSVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNM
GHHGTFLEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRE
QQQSRQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQ
LCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSQELFEEVI
SKMTKAGIKSTIAIEKFKLLSEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVIL
PSGNIMDRAIILRHLLNSPTDPFNRQPLNESMLESLPELKERIQAWMREKQGQGRFL
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagtgccgacgagatccgcagaaggagactggccagacttgcaggaggg
caaacatcccagcccagcacccccctcagcactcccctgacgtccccacagagagagaca
cccccttggccccttcctgggacctcaggggccacaccccagcccctaccaccagccgcc
tcacattcacttgggctcaatgtccagagtgtcactcccgccacctctcctattggcgca
tctggcgtgacgtactgcagtcagagcagcgagggagtgagctccctctccagctctccc
tccaacagcctggagacccagtcccagagtctttcccgatcccagagcatggacattgac
acagcctcctgtgaaaagagtagcatgtcccaggtggatgtggactcagggatagagaac
atggaggtggaggacagtgatcgcagggagaagagggacctggctgaaaaggaatccgct
gagaactcagatgtctctgaagagcaggctctgcagctcatctgtaagatcctacgcgtt
tcctggaaggagcaggacagagacgtcatttttctccccttgcttgccgcagagttccac
cagagcagcctcaaagacgttttctctgacttcaaagacctgattggccagatcctgatg
gaggtgctcctgatgtctacccagttgcacgtccacaacccctttgccagcctgactgcc
acgtccgagccaattgctgctgccaaatctcttgaccaccacctgacgctgatccagccc
tccagccagggcagcagtcccatggccccctgtgcaggctcgtttggggccagctctttg
tccagcctgtacgggtgtagtccgcactcgctggctttgaatgcagccaggatgatctct
ccacctctccctacccccaccagcccatccctgcatccaatggtagccccaagtccccct
tccatggcctacccccctaggctctctctcaacctcccttccgcccctctgcctatctcc
cagcgctaccgaccctactctgtcacctctcccttggggatctccaccccccctagcccc
agactggctagcctccctgggctttcacgcggccctatcactgaaggtctcccggtaccg
cccatcactctggccccggccccgccactaccaactagcccccagttggttcccctcccc
tctactagtcctcatccgcccacctccatgcccctccctctggtacccccctcacccaga
tcagctgcccgaggagctgccctcgccacccggatcccgtctagccccctatctctcctg
ttcttcgccctctctgatatgtctcaggacagcagtgaagaagagcctgaggatgagcag
gaggaagattttacgcaggtccagtttgggtccagtctcggtgtgtccggagggggaatg
gcctgggaatcctgcggcgaccggttcaccatcgaagcgtgcaaggagacagagatgctc
aactacctcatcgagcgctttgacagtgtgggcatggaggaaaagaaggcgcccaagatt
tgcagccaccccagtgtcagccagctcctcagcaacatacgctcacagtgtatttcccac
gccgttcttgtccttcagggtgccctcacgcagcccaggagtactctgcagcagtccctg
ctggtaccctacatgctgtgccgtaacctgccgtatggctttatccaggagctggctcgc
attacctaccaggaggatgaggtcttcagacagatctttgttccaatccttcaagggctt
ggtctggctgtgaaagaatgttccttcgacagtgacaacttcaaattccccctgatggca
ttagctgagctatgtgaaatcaagtttgtgaagactcatcccatgtgcaatttgatgacg
tctttgcccctgtggtgtcctaagtctctgagcccggggactggccgagaagtccagaga
ctctccttcctgggagccttcttcagcctgtcggtctttgcagaggatgactccaaagtt
ggtgacaagtacttctcaggccctgcgatcaccacagagaacactcgcgtggtcagtcaa
tccctgcagcactacctggagtcagccaggggtgaaatgtttaaaatcctccacaacatc
ctactgaatggagagacaagagaggtagctctcaactacatggcagctctggtcaaccgc
aatgtgaagaaagcccagatgcagacggacgacaagctggtgtccacagatggcttcatg
atcaacttcctgtcggtgctgcagcagctgagcatgaagatcaagctggagacggtggac
ccctattatatcttccacccccactgccgcctgcatgtcagccccgaggagacccggctc
aaggccaccatggaagagctcaagatctggctggccgagatgtacaacgacccctccaag
ttctctgagcccaagttccccacagagtgtttctttctgacactgcacacccaccacctg
tccatcctaccgggctgccgacgctacatccgcagactgagagccatccgtgagctcaac
aggaccgtggaggaactgaagaacagtgagagccagtggaaggactctccgctggccagc
cgacaccgagagatgctaaagagatgcaaaacccagctcaaaaaactggtgcgctccaaa
gcctgtgccgacgcagggcttctggatgagaaccttttacgcagatgtctgcagttctac
agtatggtcattcagctcatcctacgcatggtggatcccgcctacccacacatgagtcta
ccgctgaatccggagattcccaaaagctttgctgctctgccggagttttacattgaagat
gtggccgagttcctgcttttcgttgtgcagtattcccctcaggtcctgtatgagccctgc
gtccaggacattgtcacttttctggtggtgttcatctgcagtcagaactacatccggaac
ccctacctgatcgccaagctggtggaagtgctttttgtcaccaacccggcggtgcagctg
cgcacccagcgcttttccgagatgatggagaaccaccccctgtccgtcaaacagttggtc
ccggccctcatgaagttctacacagatgtggagcacaccggtgccaccagcgagttctac
gataagttcaccatccgctaccacatcagcaccatcttcaagagcctctggcagaacatg
ggccaccacggcacattcctggaggagttcaactctggcaagcagtttgtgcgctacatc
aacatgttgatcaacgacaccaccttcctgctggacgagagcctggagtccctaaagcgc
atccatgaggtccaggaggagatgaagaacaaggagcagtgggatctgcttcccagggag
cagcagcagagccgccagtcccagctgacccaggacgagcgggtgtcgcgctcctacctg
gcactggccacagagactgttgacatgttccatatccttaccaagcaggtccagaagccc
ttcctccggcccgagctggggcctcgtctggcagccatgctgaactttaacctccagcag
ctttgcgggccgaagtgccgggacctgaaggtggagaacccagagaagtatggttttgag
cccaaaaagctcctggaccagcttactgacatttacctgcaacttgactgtgcccgcttt
gccaaggccatcgccgacgaccagcggtcgtacagtcaagaactctttgaggaagttatt
tccaagatgacgaaagccggcatcaagtctaccatcgccattgaaaaattcaagctacta
tcggagaaggtggaggagattgtcgcaaggaactctcagtccgaaatggactacagtgac
gcacctgacgagtttaaagatcctctgatggacaccctaatgacagaccctgtgatattg
ccctccgggaacatcatggaccgagctatcatcctccgccaccttctcaactcccccact
gaccccttcaacagacagccgctcaacgaaagcatgctggagtcactccctgaactgaag
gagaggatccaggcatggatgagagagaagcaaggccagggacgtttcctctaa
DBGET
integrated database retrieval system
