Oncorhynchus gorbuscha (pink salmon): 124031995
Help
Entry
124031995 CDS
T07892
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124031995 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124031995 (trim33)
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124031995 (trim33)
Protein kinases [BR:
ogo01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
124031995 (trim33)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124031995 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124031995
NCBI-ProteinID:
XP_046199863
LinkDB
All DBs
Position
LG03:complement(80100176..80128401)
Genome browser
AA seq
1156 aa
AA seq
DB search
MFLRCLHPLTLVEEGTQAATAGGAGSTSSSPVGNTNGGTTESSGAGDIAGTSPTFATEMS
PPPTVPPANPVTPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPQPERQVTVQVP
GPNGQPDTHIVNVMRCIVCCQDCKQSDIIDNYFVKDTTEASNTSDEKSAQMCTSCEDNAD
TIGFCAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVSVSGQRPVFCPVHKQEPL
KLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGFIETHMAKLQEKKTYVHYSHAHV
TSRLKEVTETHRKVEHEIKIAVFTLINEINKKGKCLLQQLESVTKERSMKLFSQQTDIAN
LARQILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGSVRFFCDPT
FWAKNVVNLVGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKHPGQINLAQLRLQHMQQ
QAFAQQKQQQQQQQQHQQPHQQQQQHQQRIQEQMRIASQMSQQHPRQGGPPMVQQQPPRL
ISMQAQQRGPMNGGPLMYPPHHMRLAPGQGRMPSPSAQPRMPNGQQYPAMMQPQLQRQLT
IDSEMSHHRFRLLHLTGHSNPGHAGPFPVASLHNVSAANPTSPTSASMASAHAHRGPASP
IVGAIELIPSVTNPENLPCLPDIPPIQLEDAGSSSLDALLSRWISASTYPQLGLWPPVDM
NPSPGLSTHSPGSSGLSNSHTPVRPSSTSSTGSRGSCGSAGRPVPASAPMEQQVKVKQEP
GIEKDCGFSGTTTSNVKTERVKDGGRSACMMSSPEISRTPPLPVLGSVASASSVQDALKK
LGEHIKTEPQDQEACSGANGPSKATSTSPSTKASDAPLTNSKGAGPATLRTPRTAMGTNQ
SGAGGKDDDPNEDWCAVCNNGGELLCCDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLA
SPEMEYEPDDEPRGEKDTSEQGLSPEDQRRCERLLLNVFCHELSEGFQEPVPPSIPNYYK
IIKKPMDLTLVKQKLQLKHVQHYQSPIEFVSDVRLVFSNCAKYNEMSRIIQVYDEEKQSN
VQADSEVAQAGKAVSLYFEERLLELYPDESFPEVPEEPEAPVGEGEEADLTEDSEDEFVQ
PKRKRLKTDEKMLHIK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcagatgcctacacccgctaacgttggtggaggaggggacgcaagcagcaaca
gcggggggggcaggcagcacaagcagtagcccagttgggaacaccaatgggggtacaact
gagtcctcgggtgctggggacattgctggaacctcaccgacattcgcaaccgaaatgtcc
ccaccgccgacggttccaccagccaaccccgtcaccccaataaaccttatggatacgtgc
gctgtgtgtaaacaaagtctccagacccgtgactgtgaacccaaactattaccgtgtctt
cactcattttgcttgaaatgtatcccccagccagagcgacaagttaccgtacaggtgccc
gggccgaacggacagccagacacccacatagtgaatgtgatgcggtgcatagtttgttgt
caagactgcaaacagagcgacatcattgacaactactttgtcaaggacactaccgaggcc
tccaacacttcagatgaaaaatctgcacagatgtgcaccagttgtgaggacaacgcagat
accataggcttctgtgcagaatgtggagagtggttgtgcaagacctgtatcgaggctcac
cagagggtcaaaatcaccaaggaccacaagatccgcaagaaagaggacgtctctgaggag
tctgtaagtgtgtcgggtcagagacctgtgttctgtcctgtccacaaacaggagcccctg
aaactcttttgtgaaacctgtgacacactcacctgtcgggactgccaacttctggagcac
aaggagcacaggtaccaatttctggaggaggccttccagaaccagaaaggcttcattgag
acacacatggccaaattgcaggagaaaaagacctatgtccactattctcacgctcatgtg
acaagcaggctaaaggaagttactgagacccataggaaggtggagcatgagatcaagata
gctgtgtttactcttatcaatgaaatcaacaagaagggcaagtgtttactgcagcaactt
gagagtgtgactaaggagaggagcatgaagctgttttcccagcagacagacatcgccaac
ctggccaggcagatcctccacgtgctcaactttacccactctgccattaacagcggcagc
agcaccgccctgctttatagcaagaggctgatcatctaccagctgcgcaaggttctgaag
gctggactggaaccagtgcctcaggctaatggttctgttcgcttcttctgtgaccccaca
ttctgggctaagaatgtggtcaacctagtagggaacctggtgattgagaagatgccccag
gctcagcaccctcccaacattatggtggggcccatctccccgggccatggccacccaggc
cacggaaaacacccagggcagatcaacctggctcagctccggctgcagcacatgcagcag
caagccttcgcccagcagaaacaacagcaacagcagcagcagcagcaccaacaaccacac
cagcaacaacagcagcaccaacagaggatccaggagcagatgcgtattgcttcccaaatg
tcccagcagcaccctaggcagggtggacctccgatggtacagcaacagcccccgcgcctc
atcagcatgcaggcccagcagaggggccccatgaacggcggtcccctcatgtaccccccc
caccacatgcgcctggccccgggacagggccgcatgcccagccccagcgcccagccacgc
atgcccaatggccagcagtaccccgccatgatgcagccccagctgcagagacagctgact
atagattctgagatgagccaccacaggtttcgtttgttacatctaacagggcattctaac
ccaggtcatgctggacccttcccagtggcctctctccacaacgtgagcgctgccaacccc
accagtcccaccagtgccagcatggctagtgcccatgcccaccgtggccccgccagcccc
atagtgggtgccattgagctcataccctctgtcaccaacccagagaacctgccctgccta
ccagacatccctcccattcagctggaagatgcaggctccagcagtctggacgccctcctg
agtcgctggatctcagccagcacataccctcagctgggcttgtggccccccgtggacatg
aacccctccccgggactctccacacactcacctggctcctcaggcttatcaaactcccac
acgcccgtgcggccatccagtacttccagcacaggaagcaggggcagctgtggctctgcg
gggaggccagtgccagcgagcgccccaatggaacagcaggtcaaagtcaagcaggagccc
ggaattgagaaggactgtggcttctcaggaaccaccacctccaacgtcaaaacggaacga
gtgaaggatggagggaggagcgcgtgcatgatgagtagtccagagatcagccggactccc
cctctccccgtgctgggctctgtggcttctgcctcctctgtccaggatgccctcaagaag
ttgggggagcacatcaaaactgagccccaggaccaggaggcctgcagcggggccaacggg
ccaagcaaagccactagcacgagcccatccactaaggcctcagacgccccgctgaccaac
agcaagggagccggacctgctaccctgcgaactccacgcactgcaatggggaccaaccag
agcggggcgggaggaaaggatgatgaccccaacgaggactggtgcgccgtgtgcaacaac
gggggagagctgctttgctgtgaccgctgccccaaagtcttccacatcacctgtcacatc
cccaccttgaagtgctccccgagtggagagtggatgtgcacgttctgccggagcctggcc
agcccggagatggagtacgagcctgacgacgagcctcgtggcgagaaagacaccagtgag
cagggcctgagtcctgaggaccagaggaggtgtgagcgtctcctgctgaacgttttctgc
catgagctcagcgaggggttccaggagcctgtccctccctctatccctaattactacaaa
atcatcaagaagcccatggacttgaccctggtgaaacagaagctacagttgaagcacgtc
cagcactaccagagccccatagagtttgtctcggacgtgcgcctggtcttcagcaactgt
gccaaatacaacgagatgtctcgaataatccaggtatatgatgaggagaaacagagtaat
gtgcaggcggactcagaggtggcgcaggcagggaaagccgtgagtttgtactttgaagag
aggctgctggagctatacccagacgaaagtttccctgaggtaccagaggagccggaggcc
ccagttggagagggagaggaggcagatctcacagaagactcagaggatgagtttgtgcag
cctaaacgcaagcggttaaaaacagatgaaaagatgcttcacatcaagtga
DBGET
integrated database retrieval system
