Oncorhynchus gorbuscha (pink salmon): 124032033
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Entry
124032033 CDS
T07892
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124032033 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124032033 (nfascb)
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
L1 family
124032033 (nfascb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Ig_4
V-set_CD47
DUF3792
Motif
Other DBs
NCBI-GeneID:
124032033
NCBI-ProteinID:
XP_046199956
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All DBs
Position
LG03:complement(81649689..81678086)
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AA seq
1187 aa
AA seq
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MGMLARSTLLLLLWQGLSAIDVPLEIRQPPTIIKQSLKDHIVDPRDNMVVECEAKGTPHP
IFSWRRNGKYFNVARDPQASMRRRSGTLDIYAWADPEAYEGEYQCVATNEYGTAYSNKIN
LRISRAPLWPREVLEPVTVSVGLPLVLDCSPPPGPPKPETYWMSKCSSGRPFNWPHQPHP
PVMLPIKQDRRVSMGVNGDLYFSNVYVNDSATDYCCNARFPYKNIIQQKMPITVRVLTTR
MVSEAAPTFLSPAGRSSSQTVLQGEELLLECIAAGVPTPVITWTKDGQELDTTNMKVKNY
NKLLQIPKASFEDSGEYTCSATNKIGYLEHTITVRIKAAPFWLEKPSNLVLAPEENARLV
CRSDGIPRPSIRWFINGDTMEDATPVPNREVSGDTITFRSVTVANTGVYQCNASNQYGYL
FANAYINVLHATPRILRPRTDLVKVIEGRRAWLDCRYFGSPVPDLRWSKYGLGNLEGNRF
KVHSNGTLQIKGTRMDDQGTYLCIVSNVAGRDENQVKLEVKESTKILKRPDNMRVLRGTD
VRLECKAQHDPTVAVTTTWLKNKQFLIIGWRLSLDESTLVITNVNRGDEGNYTCIIKTEM
DKNTASARLVVMDRPDPPTNLQLSDPFERSVRLTWTPGDSNHSPIKENLVQYDDDDWLPF
KWRNLSTYPGNLNSVILQLSPFIIYEFRVIAINDIGMSKPSRSSANFQTGGAPPDAIPKN
IQGVGTWRNNMMISWEALNNREWNGPHLKYLVWWKRRDSREEWKNATTWWCKYYIYDTDT
FTPYEIKVQAVNDFGMGPESPVIIGYSGEDRPTAAPLNLRVSRIEATKVTVHWDPVARSS
IMGELKEYKVYFWRDSSQLRWLSVSRAMKSKAFPASGPRLSGVLPGLIPYSNYKMYIVVA
NNRYEGHPSNTIEFSTPEGTPSAPRSFRIQQRHLDMIWVDWDTPAEPNGIVTGYILKYQT
VNATQGEELHVEGFPPNTTSFAVRRYDRYTRYRFTIAAQTRIGVGEWYTEESPHYTTEAY
AREQVDLSTQGWVIGVMCAVALFVLILLVVCFIKRSRGGKYPVRDKKEVTLEPVDDKDQE
GSFDYRSLERISRVTTIPYSARREEETKVGRGQTTVDTMMKRTDSDDSLVDYGDGQEIEF
NEDGSFIGQYTGHKERDDRDTEFSESRSQEAHSPMANSPMSPIYSFA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggggatgctggccagatccactctattactactgttatggcaaggactgtctgccatt
gacgtcccactggaaatcagacagccccccaccattataaaacagtcgttgaaggatcat
atcgtggaccccagagacaacatggtcgttgagtgtgaagccaaaggcaccccccaccca
attttctcatggaggcgtaatgggaagtatttcaatgtggcacgggaccctcaggcctcg
atgaggagacgttcggggacgctggacatctatgcctgggctgacccggaggcttatgag
ggggagtaccagtgtgttgccaccaatgagtatggcactgcatactcaaacaagatcaac
ctacgcatctctagggcccctctgtggcccagagaggttttggaaccggtaacggtgagt
gttggtcttcctctggtcctggactgcagccctcctccaggccctcccaaacctgagacc
tattggatgagcaagtgttcatcagggagacctttcaactggcctcaccagccccacccc
ccagtcatgctgcctatcaaacaagaccgtagagtgtctatgggggtgaatggagatctc
tacttctctaatgtctacgtcaatgactctgccaccgactactgttgcaacgcgcgcttc
ccctacaaaaacatcattcaacagaagatgcctattaccgttagagtccttacaactcgc
atggtgtcagaggccgctcccaccttcctgtctccagccgggaggtccagctcccagact
gtcctgcagggggaggagctgctcctcgagtgcatcgctgctggagttccaacccctgtc
atcacatggaccaaagatggacaggaactggacacgaccaacatgaaggtgaagaactac
aacaagttactgcaaatccccaaggcctcttttgaggactctggtgaatacacgtgcagt
gccacaaacaagattggatacttggaacacaccatcactgtccggatcaaagctgctccg
ttctggttggaaaagcccagtaacctggtgctggccccagaggagaatgcacgcttagtg
tgccgctcggacggcatcccccggcccagtatccgttggttcatcaacggagatacaatg
gaggatgctactccagtcccaaacagggaggtgtccggagacacaattaccttccgttct
gtgactgtggcgaacactggtgtttaccagtgcaatgcctctaaccagtatggctacctg
tttgccaatgcttacatcaacgtactgcatgcaacgccacgtatccttaggcctaggact
gacctggtgaaggtcattgagggcagacgcgcctggctagactgccgctattttggctcg
cccgtgcctgatctgcgctggtctaagtatggactgggcaacctggaggggaatcgcttt
aaagtgcacagcaacgggacactacagatcaaaggcacccgtatggatgaccaggggaca
tatctgtgtattgtcagcaacgtagcaggacgagatgaaaaccaggtcaaactagaagtc
aaagagtccaccaaaattctcaaacgcccagataatatgagagtcctccgggggactgat
gtccggttggagtgtaaggcccaacatgaccccacggtcgccgtcaccaccacctggctg
aagaacaaacagttcctcatcataggctggaggctgtcgctggatgaatcaactctggtc
atcacaaatgtcaatagaggagacgagggcaattacacctgcatcatcaagactgagatg
gacaagaacactgcctccgcccgcctggtggtgatggatcgtccagacccccctacaaac
ttgcagttgtcggacccctttgagcgcagcgtcaggcttacctggacccctggagatagc
aatcacagtcctatcaaagaaaacctggtgcagtatgatgatgacgactggttacctttc
aagtggagaaacctttccacgtaccctggaaacctgaactctgtcattctgcaactgtca
ccattcattatctatgagtttagggtcattgctatcaatgacattggtatgagtaaaccc
agtcgctcgtcagccaacttccagactggtggagcacctccagacgccatccctaaaaac
atccagggagtgggaacatggagaaacaacatgatgatcagctgggaggcattaaacaac
agagagtggaacggtccccacctaaagtacttggtgtggtggaaacggagggattccagg
gaggagtggaagaacgctaccacttggtggtgtaaatactacatctacgacacagacacc
ttcacaccatacgagataaaggtccaggctgtcaatgactttgggatgggcccagagtcc
cctgtcatcataggctactctggagaagaccgtcccactgctgcccccctcaacctgcgt
gtgtccaggatagaggccactaaggtcaccgtgcactgggaccccgtggctcgcagcagc
atcatgggagaattgaaggaatacaaggtctacttctggcgagacagtagccagctgagg
tggctgagtgtgagcagggccatgaagtcgaaagcctttccagccagcgggccgcgtctc
tctggtgtcctgccgggactcatcccttacagcaactacaagatgtacatagtggtggcc
aacaaccgatacgagggacatcccagtaacaccatagagttctccactccagagggaaca
ccctctgctccaagatccttcagaatccagcagagacatttggacatgatctgggtggac
tgggacactcctgcagagcccaatggcatcgtcaccggatacatactcaaatatcagaca
gtgaacgcaactcagggggaagaattgcacgttgagggatttcccccaaacaccaccagt
tttgctgttcgcagatatgatcgctacacccgctatagattcaccatagcagcacagact
agaatcggggtaggagagtggtacacagaggaatcaccccattatacaactgaagcttat
gctcgggagcaggtggacctctccactcagggctgggtaattggtgtgatgtgtgctgtg
gctctcttcgtgctcatcctgctggtcgtctgctttatcaaaaggagccgagggggcaaa
tacccagtacgggacaagaaagaagtgacattggagccagtggatgacaaagatcaggag
ggatcatttgactatcggtctctggaaaggataagtcgtgtcaccaccattccctactct
gcccgacgggaggaagagactaaagttggcaggggccagacgacagtagacaccatgatg
aaacggacagatagtgacgacagtctggtggactatggtgatggacaggagattgagttc
aacgaggacggctccttcattggccagtacactggacacaaggagagggatgacagagat
acagagttcagtgagagcaggagccaggaagcccactccccgatggctaactcccccatg
agccccatctattcatttgcataa
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