KEGG   Oncorhynchus gorbuscha (pink salmon): 124032226
Entry
124032226         CDS       T07892                                 
Name
(RefSeq) cyclin-T1-like isoform X1
  KO
K15188  cyclin T
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124032226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogo03021]
    124032226
Transcription machinery [BR:ogo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     124032226
    Brd4/P-TEFb complex
     124032226
    7SK RNP complex
     124032226
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N BUR2_N
Other DBs
NCBI-GeneID: 124032226
NCBI-ProteinID: XP_046200425
LinkDB
Position
LG03:92541870..92553064
AA seq 693 aa
MAASFPSPSGTNNKWYFTREQIENSPSRRVGLDPDKELSYRQQAANLLQDMGQRLNVSQL
TINTAIVYMHRFYMIQSFTRFHRNVIAPATLFLAAKVEEQPRKLEHVIKVTHACLNPQDP
SPDVRSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRVVPASKDLAQTS
YFMATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWEYVDNTVTLELL
DELTHDFLQILEKTPSRLKRIRNWKAAGQTVKGGKSKVPEDGDQTDCMMSMISMSSSETT
LASLSNPSSSSMAPILLELKSTLGSGSDQPNHVELHAPAKVSLSEYRAKHADVLAAQKRK
LENMEASVKREYASAAQALIGQHQRKEKYHRDQPQSSSHHSSLASSDLSSPSPIILKIPL
EKERGERSSLKMRLPLGTGGGGGHSGGGNRGAGGEQDIKVRIRVPEKVRSAGSGEEGGKS
REGKHRDRSHHHHHHHHHHHSSSSLSGASVSSSSSHKHSASAAGAVGGSGSKKTPSDSSR
MSSSSASRKRTHSTESQGSHPSKVSKSSRNSAYQLPALLAASSAHSLGVQTAEILPSLGL
PSLHQGNFSHCKGDKTDTNGHNAGGGSQSNEYQDTFEMLNSLLSAQGVQPAQPPMFDYRS
QYGEYRYSGGSRGGSRPPPLPAEPPPPLPPLPK
NT seq 2082 nt   +upstreamnt  +downstreamnt
atggcggcttcgttcccttctccttctggaacaaacaacaaatggtacttcacccgagaa
cagatcgagaatagcccatctcgtcgtgtggggcttgatccagacaaggaattatcatac
agacagcaagccgcgaaccttctacaggacatgggacagcgactcaatgtgtcccagcta
acaattaatactgctattgtgtatatgcaccgattctacatgatccagtccttcaccagg
ttccacagaaatgtcatagctccagcgacactattccttgctgcaaaggttgaggaacag
ccccgcaagttggagcatgttatcaaggtgacccatgcatgccttaaccctcaggaccct
tcaccagacgtccgcagtgatgcttacctgcaacaagcccaagacctggtcattcttgag
agcattatactccagaccctggcttttgaaatcaccattgaccacccacatactcacgtt
gtcaagtgcacccagctcgtcagagttgtcccagcgagtaaggatttggcccagacctca
tacttcatggctaccaacagcctacacctgaccacattctgcctgcagtacagcccaccc
atagtggcctgcgtctgcatccacctggcttgcaagtggtccaactgggagatccctgtc
tccacagacggcaagcactggtgggagtatgtagacaatactgtcacccttgagctgctg
gatgaactcactcacgacttcctacagatcttggagaagacaccaagccgattaaaacgc
attcgcaactggaaagcggcaggtcagacagtgaagggagggaagtctaaggtgccagag
gacggggaccagacagattgtatgatgagcatgatctccatgtcgtcctctgagaccacg
ctggccagcctctctaacccttcctcttcatccatggctcccatactactggagctcaag
tcgaccctgggcagtggctccgaccagcccaaccacgtagagctgcacgccccagccaag
gtgtcactgagtgagtaccgggccaagcacgctgatgtcctggctgctcagaagaggaag
ctggagaacatggaggccagcgtgaagagggagtatgcctcggcagcccaagctctgata
ggccaacatcagaggaaggagaagtaccaccgtgatcagccgcagtccagctcccaccat
tccagcttagcctcctctgacctcagcagcccctcgcccatcatcctcaagatccccctg
gaaaaggagaggggcgagcgcagctccctgaagatgcgcctccctctggggactggggga
ggaggggggcacagtggaggagggaacagaggagccggaggagaacaggacatcaaagtg
agaatccgggtgcctgagaaagtacgcagtgcaggctcgggagaggaggggggcaagagt
agggagggcaagcatcgagatcgctcccaccaccaccaccatcaccaccaccaccatcat
tcatcgtcgtctttgagcggtgcttctgtctcttcgtcctcgtcacataaacactcagcc
agtgctgctggagctgtaggaggaagtggtagcaaaaagacccccagtgactcatctaga
atgagctcttcctctgcttctcgaaagaggacacactccactgagtcccagggatcccac
ccctccaaagtctctaagtcctccaggaactcagcctaccagctacctgctctgttagct
gcctccagtgcacactccctgggggtgcaaactgctgagatcctcccatccttgggtctc
ccctccctccaccagggaaacttctctcactgcaagggggacaagactgacactaacgga
cacaatgcaggtgggggaagccagtcaaatgagtaccaggacacatttgagatgctgaac
tctttactgagtgctcagggggtccaacctgctcagcctcccatgtttgactaccggtct
cagtacggggagtacagatacagtggagggtcgagggggggctctcgaccgccacccctg
cctgctgaacctccacccccgctaccccctttacccaaatga

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