Oncorhynchus gorbuscha (pink salmon): 124032322
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Entry
124032322 CDS
T07892
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04514
Cell adhesion molecules
ogo04672
Intestinal immune network for IgA production
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124032322
04514 Cell adhesion molecules
124032322
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124032322
09142 Cell motility
04820 Cytoskeleton in muscle cells
124032322
04810 Regulation of actin cytoskeleton
124032322
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
124032322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124032322
04515 Cell adhesion molecules [BR:
ogo04515
]
124032322
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124032322
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin beta subunits
124032322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_2
PSI_integrin
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
124032322
NCBI-ProteinID:
XP_046200588
LinkDB
All DBs
Position
LG03:complement(96844240..96864047)
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AA seq
808 aa
AA seq
DB search
MFTSPGKSLMSPDCLAEGDSRTGRQKSGCVGAIQTMRKVWLAVVVLLIHFTELRGSMGLD
GRCLSKPTCTECLRSLGCAWCKQKDFLAQGEPDERRCDREEALRKRHCSDGQVLNPQPAI
RSRAEEPMGSGVQLEPQNLHLKLRVGMPQSFEVRFRRAEVYPIDLYYLMDLSFSMKDDLK
NIRNLGREVATALKNITSVVRIGFGSFVDKVVEPYVSTVEAKLANPCNEGYKSPCQPAFS
FKHVLKLTEDVEEFERKVSKQSISSNLDNPESGFDAIMQVAVCQDDIGWGNATRILVYTS
DDTFHLAGDGKLAGIYQPNDGKCHLNSNGLYNKDTVYDYPSVGHLSQVISANNIRLIFAV
TDQQIQNYEALSEMIPQSVVGLLEDDSSNVVQLISEACNNLSSSILLEHHDVPPGLGVSY
SSHCGDDRLAQGQDRGECSDVRTNQQVNFTVTVTSSSCLSKTESFIIKVQGINEELRVTV
ETLCDCDCQDSEEQSSQCHGNGTFHCGICSCDSGHTGQRCECETQPDKDTSLALETLCSP
AQTNSTGTPLCSGHGSCVCGQCICWGQHRGQHCQCDDISCNRHNNMICGGNGRCDCGNCE
CFHNYTGPACGCSILTDQCQTSNDGICSHRGQCECNECHCHPGFFGSHCTKPLAPCDTYR
ACVACMLHESAINVCHHPCGSAKPIRINGTQSFTCQDDTVRFNVELIINTGDIFVYYTDT
PRGIDPWIINMGKAVVGIVLLGVIMIIIYRLMLEVSYQRERRRFLKDKENICWEDTQNPL
FQEAKTTFTHPMHVLEPDADCATSTFGK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgttcacttcacctgggaagtccctgatgtccccagactgtcttgcagaaggagattcc
agaactgggagacagaaaagtggatgtgttggtgccatccagacaatgagaaaggtgtgg
ctggctgtggtggttcttctgatacacttcactgagctgagaggatctatgggcctggat
ggaagatgcctgtctaagcccacctgcactgagtgtctgagaagccttggctgtgcctgg
tgtaaacagaaggatttcctggcgcaaggggagccagacgagcgtcgctgtgacagggag
gaggcactgaggaagagacactgctctgacggacaggtcctgaacccccagcctgcaata
cggagcagggcagaggagccaatggggagcggggtccagctagagccacagaacctccac
cttaagctaagagtcggcatgccccagtcatttgaggtgaggttcaggcgtgcagaggtt
tatcccatagacctgtactacctgatggacctgtctttctccatgaaagatgacctgaag
aacattaggaacctgggacgggaggtggccactgccttgaagaacatcaccagtgttgtc
aggataggctttggttcctttgtggataaggtggtggaaccctacgtcagtacagtggag
gccaaactggccaacccatgcaacgaggggtacaagagcccctgccagcctgccttcagc
ttcaaacatgtactgaagctcactgaggacgtggaagagtttgagagaaaggtgagcaag
cagagcatctccagtaacctagacaacccagagtcaggctttgacgccatcatgcaggtg
gctgtctgtcaggatgacattggctggggtaatgcaactcgtatcctggtctacacctca
gacgataccttccacctggcaggtgatgggaagcttgctgggatctaccaacctaacgac
gggaaatgccacctgaatagcaatgggctctataataaggacaccgtttatgactatccc
tcagttggacacctatctcaggtcatatcagccaataacatcaggctgatctttgcagtg
acagaccagcaaattcaaaactatgaggcactcagtgagatgatcccccagtcggtggtg
ggcctcctggaggatgactccagcaacgttgttcagctcatctctgaggcctgcaacaac
ctatcgtcatccatcctcctggagcaccatgacgtcccaccaggcctgggggtctcctat
agctcccactgtggtgatgacaggctagctcaggggcaggacagaggggagtgcagtgat
gttagaaccaatcaacaggtcaatttcacagttactgtgaccagctcgagctgtctgtcc
aagacagagtctttcatcatcaaagtgcagggtatcaatgaagaactgagggttaccgtg
gagacgctgtgtgactgtgactgtcaggactctgaggaacagtcatcccagtgtcatggc
aatggaacattccactgtggtatttgtagctgtgattcaggacacacaggccagcgttgt
gagtgtgaaacacagccggacaaagacaccagtctggccttagagaccctgtgttcacct
gcacagacaaacagcacaggcacaccactgtgcagcggccatgggagctgtgtgtgtggc
caatgtatctgctggggccaacacaggggccaacactgccagtgtgacgacattagctgt
aaccgtcacaacaacatgatctgtggcggtaatgggaggtgtgactgtggtaactgtgag
tgtttccacaactacacaggccctgcatgtggatgctctatcctcacagatcagtgccag
accagtaacgatggaatctgctctcaccgaggacagtgtgaatgtaatgaatgccattgt
caccctggtttctttggcagccactgcaccaagcccctggcaccatgtgacacataccgg
gcctgtgttgcttgcatgttacatgagtcagccataaatgtgtgtcaccatccctgtggc
tctgccaagcctatccgcatcaatgggactcaatcattcacctgtcaggatgatactgta
cgttttaatgtggaactcatcataaatactggtgacatctttgtctactacacagatact
ccaagagggattgacccatggattataaacatggggaaggcagtggtaggaatcgtttta
ctgggtgtcatcatgataataatttaccggctgatgttagaagtgtcctaccagcgggag
cgtagaaggttcctgaaggataaggaaaatatctgctgggaagacactcaaaatccactg
ttccaagaggccaagacaacattcacccaccccatgcatgtgttggagccagatgcagat
tgtgctacatcaacctttggaaaataa
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