KEGG   Oncorhynchus gorbuscha (pink salmon): 124032322
Entry
124032322         CDS       T07892                                 
Name
(RefSeq) integrin beta-7-like isoform X1
  KO
K06590  integrin beta 7
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
ogo04514  Cell adhesion molecules
ogo04672  Intestinal immune network for IgA production
ogo04810  Regulation of actin cytoskeleton
ogo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124032322
   04514 Cell adhesion molecules
    124032322
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124032322
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124032322
   04810 Regulation of actin cytoskeleton
    124032322
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    124032322
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124032322
   04515 Cell adhesion molecules [BR:ogo04515]
    124032322
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124032322
Cell adhesion molecules [BR:ogo04515]
 Integrins
  Integrin beta subunits
   124032322
SSDB
Motif
Pfam: Integrin_beta EGF_2 PSI_integrin Integrin_b_cyt EGF_integrin I-EGF_1 EGF_Teneurin EGF_TEN vWA_SIBA-E
Other DBs
NCBI-GeneID: 124032322
NCBI-ProteinID: XP_046200588
LinkDB
Position
LG03:complement(96844240..96864047)
AA seq 808 aa
MFTSPGKSLMSPDCLAEGDSRTGRQKSGCVGAIQTMRKVWLAVVVLLIHFTELRGSMGLD
GRCLSKPTCTECLRSLGCAWCKQKDFLAQGEPDERRCDREEALRKRHCSDGQVLNPQPAI
RSRAEEPMGSGVQLEPQNLHLKLRVGMPQSFEVRFRRAEVYPIDLYYLMDLSFSMKDDLK
NIRNLGREVATALKNITSVVRIGFGSFVDKVVEPYVSTVEAKLANPCNEGYKSPCQPAFS
FKHVLKLTEDVEEFERKVSKQSISSNLDNPESGFDAIMQVAVCQDDIGWGNATRILVYTS
DDTFHLAGDGKLAGIYQPNDGKCHLNSNGLYNKDTVYDYPSVGHLSQVISANNIRLIFAV
TDQQIQNYEALSEMIPQSVVGLLEDDSSNVVQLISEACNNLSSSILLEHHDVPPGLGVSY
SSHCGDDRLAQGQDRGECSDVRTNQQVNFTVTVTSSSCLSKTESFIIKVQGINEELRVTV
ETLCDCDCQDSEEQSSQCHGNGTFHCGICSCDSGHTGQRCECETQPDKDTSLALETLCSP
AQTNSTGTPLCSGHGSCVCGQCICWGQHRGQHCQCDDISCNRHNNMICGGNGRCDCGNCE
CFHNYTGPACGCSILTDQCQTSNDGICSHRGQCECNECHCHPGFFGSHCTKPLAPCDTYR
ACVACMLHESAINVCHHPCGSAKPIRINGTQSFTCQDDTVRFNVELIINTGDIFVYYTDT
PRGIDPWIINMGKAVVGIVLLGVIMIIIYRLMLEVSYQRERRRFLKDKENICWEDTQNPL
FQEAKTTFTHPMHVLEPDADCATSTFGK
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgttcacttcacctgggaagtccctgatgtccccagactgtcttgcagaaggagattcc
agaactgggagacagaaaagtggatgtgttggtgccatccagacaatgagaaaggtgtgg
ctggctgtggtggttcttctgatacacttcactgagctgagaggatctatgggcctggat
ggaagatgcctgtctaagcccacctgcactgagtgtctgagaagccttggctgtgcctgg
tgtaaacagaaggatttcctggcgcaaggggagccagacgagcgtcgctgtgacagggag
gaggcactgaggaagagacactgctctgacggacaggtcctgaacccccagcctgcaata
cggagcagggcagaggagccaatggggagcggggtccagctagagccacagaacctccac
cttaagctaagagtcggcatgccccagtcatttgaggtgaggttcaggcgtgcagaggtt
tatcccatagacctgtactacctgatggacctgtctttctccatgaaagatgacctgaag
aacattaggaacctgggacgggaggtggccactgccttgaagaacatcaccagtgttgtc
aggataggctttggttcctttgtggataaggtggtggaaccctacgtcagtacagtggag
gccaaactggccaacccatgcaacgaggggtacaagagcccctgccagcctgccttcagc
ttcaaacatgtactgaagctcactgaggacgtggaagagtttgagagaaaggtgagcaag
cagagcatctccagtaacctagacaacccagagtcaggctttgacgccatcatgcaggtg
gctgtctgtcaggatgacattggctggggtaatgcaactcgtatcctggtctacacctca
gacgataccttccacctggcaggtgatgggaagcttgctgggatctaccaacctaacgac
gggaaatgccacctgaatagcaatgggctctataataaggacaccgtttatgactatccc
tcagttggacacctatctcaggtcatatcagccaataacatcaggctgatctttgcagtg
acagaccagcaaattcaaaactatgaggcactcagtgagatgatcccccagtcggtggtg
ggcctcctggaggatgactccagcaacgttgttcagctcatctctgaggcctgcaacaac
ctatcgtcatccatcctcctggagcaccatgacgtcccaccaggcctgggggtctcctat
agctcccactgtggtgatgacaggctagctcaggggcaggacagaggggagtgcagtgat
gttagaaccaatcaacaggtcaatttcacagttactgtgaccagctcgagctgtctgtcc
aagacagagtctttcatcatcaaagtgcagggtatcaatgaagaactgagggttaccgtg
gagacgctgtgtgactgtgactgtcaggactctgaggaacagtcatcccagtgtcatggc
aatggaacattccactgtggtatttgtagctgtgattcaggacacacaggccagcgttgt
gagtgtgaaacacagccggacaaagacaccagtctggccttagagaccctgtgttcacct
gcacagacaaacagcacaggcacaccactgtgcagcggccatgggagctgtgtgtgtggc
caatgtatctgctggggccaacacaggggccaacactgccagtgtgacgacattagctgt
aaccgtcacaacaacatgatctgtggcggtaatgggaggtgtgactgtggtaactgtgag
tgtttccacaactacacaggccctgcatgtggatgctctatcctcacagatcagtgccag
accagtaacgatggaatctgctctcaccgaggacagtgtgaatgtaatgaatgccattgt
caccctggtttctttggcagccactgcaccaagcccctggcaccatgtgacacataccgg
gcctgtgttgcttgcatgttacatgagtcagccataaatgtgtgtcaccatccctgtggc
tctgccaagcctatccgcatcaatgggactcaatcattcacctgtcaggatgatactgta
cgttttaatgtggaactcatcataaatactggtgacatctttgtctactacacagatact
ccaagagggattgacccatggattataaacatggggaaggcagtggtaggaatcgtttta
ctgggtgtcatcatgataataatttaccggctgatgttagaagtgtcctaccagcgggag
cgtagaaggttcctgaaggataaggaaaatatctgctgggaagacactcaaaatccactg
ttccaagaggccaagacaacattcacccaccccatgcatgtgttggagccagatgcagat
tgtgctacatcaacctttggaaaataa

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