Oncorhynchus gorbuscha (pink salmon): 124032372
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Entry
124032372 CDS
T07892
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124032372
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
124032372
NCBI-ProteinID:
XP_046200687
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All DBs
Position
LG03:complement(100688494..100725300)
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AA seq
818 aa
AA seq
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MGILTHCVLLFLLQHLTSAYAFKEGLDNGQYAFVKDPSLNIEKRSADVELFQFDSESPEH
SRSRRSADQEDCKSLQGFDTKLTNNTHTYSFNDLSGSVSLAWVGDATGVILALTTFQVPF
FMLRFAQSKLYRSENYGKSFQDVTNLINNTFIRTEFGIAIGPENSGKVILTGDVSGNLGS
HIFISRDFGNSFEQQDLPFNPLMQITYNPRDAKVLLVISNTKELWLSEDFGENWRKIHDM
VCLFKWGMDSNIFFTTSLNGSCNDLGMLDLMRSTDYGKTIKTVATKIFSFGLGGKFLFAS
VMTGTGTLRRIHVSTNQGEEWNMAQLPPVGHEEFYSILAANEDMVFMHVDEPGDTGYGTI
YVSDDRGTVYSKSLERHLYTTTGGDTDFTKVTSLRGVFITSILAEDGLVQSVVSFDQGGE
WVPLQKPANTKCDSTAKDPDKCSLHIHAAYSAAMKLNVPMLPLSEPNAVGLIMAHGSVGD
AISVMKPDVFVSDDGGYTWLQALEGPHHYAILDSGGLLVAVEHSAQLIKDIKFSTDEGQC
WHVHQFTSDPIHFTGLAVEPGARSMNVSVWGYRDSLLSQYWVSVTVDFRELLTRTCEDQD
YVQWLAHSDDISDPNDGCMLGYKEKLLRLRKASVCWNGRDYEVNKQPTPCLCTLDDFLCD
FGYYRKENSSECVEQPDLKGHLLEFCLQGKEELLQTKGYRKIPGDKCEGGKQPERKEIDL
SKRCVSDLLGPQELLMDGHLSSSAPIIVTVLIIVLLAIIAGVLIVKKYVCGGRFLVHSYS
VLQQHAEAQGLDEPLDSNFTQTRNMADFHDDSDEDLLE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggaattctaacgcactgtgttttactttttttattacagcatttgacgtccgcttat
gcttttaaagaaggactagacaacggacagtatgcatttgtgaaagatcctagtttgaat
atcgaaaagagatctgcagatgtagaattattccagtttgactctgaatcacccgaacac
agtcggagcaggagaagcgctgatcaagaggactgtaaaagtctccagggattcgacacc
aagttgactaacaacacccacacctattccttcaatgacctgagcgggtccgtgtcactg
gcctgggttggagacgccaccggggtcatcctggctttgacaacattccaggttccattc
ttcatgttgagattcgcccagtccaaactctatcgaagtgagaactacgggaagtcgttc
caggatgtcacaaacctcatcaacaacactttcatcaggacagagttcggcatcgccatc
ggaccagagaactctgggaaggtgatcctgacaggtgacgtgtctggcaacctgggatct
catatctttatctccagagactttgggaacagctttgagcagcaggaccttcctttcaac
cccctgatgcagatcacatacaaccccagagatgccaaagttctcctggttatcagcaac
actaaagagctctggctgtcagaggactttggagagaactggaggaagatccatgacatg
gtgtgtctgttcaaatgggggatggacagtaacatattcttcaccaccagcctcaatgga
tcctgcaatgacttggggatgctggacttgatgagatcgacggactacgggaagaccatc
aagactgttgccactaagatcttctctttcggcctggggggaaagttcctgtttgcttct
gttatgactggaactggcactctgaggaggatccatgtgtcgacgaaccagggggaggag
tggaacatggctcagctgcctccggttggccacgaggagttctattctatcctggcagcc
aatgaggacatggtgttcatgcacgtggacgaaccaggagacacaggctatggcaccatc
tacgtgtcagacgacaggggtaccgtgtactctaagtctctggagcgtcacctctacacc
accacagggggtgacactgacttcaccaaagttacctctctacgaggggtcttcatcacc
agtatactggcagaggatggcttggtgcagtccgtggtgtccttcgaccagggaggggaa
tgggtgcccctgcagaaacctgccaacaccaagtgtgactccacagccaaagaccccgac
aagtgcagtctccacatccacgcagcttacagcgcggctatgaagctgaacgtccccatg
ctgcctctcagtgaaccaaacgctgtaggactcatcatggcgcacgggagtgtgggcgat
gccatctctgtgatgaagcctgacgtgttcgtgtcagatgatggaggttacacctggcta
caggccctggagggacctcaccactatgccatcctggactctggtggactcctggtggcc
gtggagcactctgctcagctcatcaaagacatcaagttttccacagacgagggccagtgc
tggcacgttcaccagttcaccagcgatcccatccacttcacagggctagcggtggagcca
ggggcgaggtctatgaacgtcagtgtctggggctacagagactctctgctcagtcagtac
tgggtatctgtcaccgttgacttccgagagctgctcactagaacctgtgaggaccaggac
tacgtgcagtggctggcacactctgatgacatcagcgaccctaacgacggctgtatgctg
ggttacaaggagaagttactgcgtctaaggaaggcctcggtctgctggaacggacgagac
tatgaggtcaacaagcaacccaccccctgcctctgcaccctggatgactttctgtgtgac
tttgggtactatcgtaaagagaacagctctgagtgtgtggagcagccggacctgaagggt
caccttctggagttctgtctgcaaggcaaggaggagctgctgcagactaaaggctatagg
aagatccccggggataagtgtgagggaggaaaacagccggagagaaaagagatcgacctc
agtaagaggtgtgtcagtgatctgctgggacctcaggaactactgatggacggccatctg
tccagctctgcacccatcatagtgactgttttaatcattgtgctgctcgcaatcatagct
ggggtcctcatcgtcaagaagtatgtctgcggtggcaggttcctggtacacagctactct
gtcctacagcagcatgctgaggcccagggactagacgaacccctagacagcaacttcact
cagaccagaaacatggccgacttccacgacgattcagacgaggatcttctggagtaa
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