Oncorhynchus gorbuscha (pink salmon): 124032438
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Entry
124032438 CDS
T07892
Name
(RefSeq) CUGBP Elav-like family member 2
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124032438
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124032438
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
DUF6173
Motif
Other DBs
NCBI-GeneID:
124032438
NCBI-ProteinID:
XP_046200800
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Position
LG01:complement(10434533..10485835)
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AA seq
549 aa
AA seq
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MLEHSSDLALVQSLYVNSMRCPPSASAAGVPVRNEDLGSLSNGSKMNGSIENLETPDHDS
IKMFVGQIPRSWTETELKELFEPYGAVHQINILRDRTATPPQSKGCCFVTFYTRKAALEA
QNALHNIKTLTGMHHPIQMKPADSEKTNAVEDRKLFIGMVTKKYGENEVRLMFSAYGQIE
ECRILRGPDGLSRGCAFITFSTRAQAANAIKSLHHSQTMEGCTSPMVCKFADTQRDKEQR
RLQQQMAQQMQQLNSASTWGNLAGLGGLTPQYLALLQQATATSNQSTFGNQSTFGNQSFG
NQSSFGGMQRLGGVNQLQLQNLATLAAAASAAQNSGGSTNTLSANGALGNLYNSAAGQTA
GSSAGAAMNTLASLGLTQGLGGGLTGASMGLNNLNALTGGGMAAMNGGLGASMANGSGAS
SMDALTQAYSGMQQYTASALPSLYSQSLLQGAAGGSQKEGPEGANLFIYHLPQEFGDQDV
LQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLK
RSKNDSKPY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacactcgtcggatctagccctggtgcagagcttgtatgttaacagcatgcgc
tgtcccccctctgcctccgccgctggtgtccctgtcaggaatgaggacctaggatctctg
agcaacggcagcaagatgaacggttccattgagaacctggaaacacctgaccatgactcc
atcaagatgttcgttggccagatacctcgctcctggacagaaaccgagctcaaggagctg
tttgagccctacggcgccgtgcaccagatcaacatcctccgagaccgcaccgccacaccc
ccccagagcaaaggatgctgttttgtaacgttttataccagaaaagctgccctggaggcc
cagaatgcattgcacaacataaagaccttaactgggatgcatcatcccatccagatgaaa
cccgccgacagcgagaaaacaaacgcggtggaagataggaaactctttatcggaatggtg
acgaagaaatacggcgagaatgaggttcggctgatgttctctgcttacggccagatagag
gaatgccgaattctccgtggacccgacggtctgagcagaggctgtgcgtttatcacattt
tctaccagggctcaggctgcgaatgcaatcaaatccctgcatcattctcagacaatggag
ggctgcacttctcccatggtgtgtaagtttgcggacactcagagggacaaggagcagcgg
cgcctgcagcagcagatggcccaacagatgcagcagctcaacagcgcctccacctgggga
aatctggcagggttgggaggcctcacgccacagtacttagccttgctccaacaggcgacg
gctaccagtaaccagagtacttttggcaaccagagtacttttggtaaccagagttttggt
aaccagagtagttttggtggcatgcagagactgggaggtgtgaaccagctgcagctgcag
aacctggccacattagcagctgccgcctctgcagcccaaaactcaggcggctccaccaac
accctgtcagccaacggcgctttaggtaatctctataactcagcagcaggccagactgca
ggttccagcgcgggtgcagccatgaacaccctggcctctctgggcctgacccagggcctt
ggcggcggtctgacgggcgcttccatgggcctcaacaacctcaacgccctcactgggggg
ggtatggctgctatgaacgggggcctgggggcctcgatggctaatggctctggagcgagc
tccatggatgccctgacccaggcttactcagggatgcagcagtacactgcgtccgccctg
ccttccctctacagccagtccctgctgcagggtgcagccggcgggagccagaaggagggt
cctgagggggctaacctgttcatctatcacctgccccaggagtttggagaccaggatgtc
cttcagatgttcatgccttttggaaacgttgtctctgccaaagtcttcattgacaaacag
accaatctgagcaagtgcttcgggttcgtcagctacgacaatccagtgtcggcacaggcc
gccatccaggccatgaacggcttccagatcggcatgaagaggctcaaggtgcagctgaag
cgctccaagaatgacagcaaaccctactga
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