Oncorhynchus gorbuscha (pink salmon): 124033072
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Entry
124033072 CDS
T07892
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124033072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124033072
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
NGL family
124033072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
LRR_14
Ig_3
LRR_9
ig
V-set
Ig_2
Ig_6
LRRNT
Syndecan
Motif
Other DBs
NCBI-GeneID:
124033072
NCBI-ProteinID:
XP_046200952
LinkDB
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Position
LG04:complement(605457..700245)
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AA seq
621 aa
AA seq
DB search
MLITMISSLQRQTMRDPRLRGARSYPLFVLLLALQILAVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFQDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQISVIGPGSF
AGLANLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHTPASYRGRYIGELEHSYFQCDVPVIVEP
PADRNVTEGMAAELKCRTSSLTSVSWLTPNGSLVTHGAYKVRLAVLNDGTLNFTTVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETTETVDDSQTPALPPIGWVS
SSTTRGPPVQTRTTERTYTVSVLDLDGEGDRGLEEVMKTTKIIIGCFVAITLMAAVLLVI
FYKMRKQNHQQDPDGPASSMEVITVEEELAGVAAMETHLHLPPLEHYNHYNTYRSTYHHS
HTQEPLLIQASSKDNVQETQI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcacaatgatctcctccctccagcgccagacaatgagagatcctaggctgagg
ggggctcggtcctatcccctcttcgtgctactgttggccctccagatcctggcggtggcc
ggcctggtgcgtgcccagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacccgccggagcctgcgcgatgtccccgacggcatctcaaccaacacacgt
tacctgaacctgcaggacaacctcatccaggtgatcaaggtggacagcttcaagcatcta
cggcacctggaaatcctgcagctgagcaagaaccacatccgcaacatcgagattggcgcc
ttcaacggcctggccagtctcaacaccctggagctgttcgacaaccgtctcaccaccatc
cccaatggggcgttcgagtacctctccaagctcaaggagctgtggctgaggaacaacccc
attgagagcatcccgtcgtacgccttcaaccgggtcccctcgctgcgaagactggacctt
ggagagctcaagcggctctcctacatctcagatggagccttccaggacctcagcaacctg
cgctacctgaacctgggcatgtgcaacctcaaggagatccccaacatcctacccttggtc
aggctggaggagctagagatgtcagggaaccagatctctgtcatagggcctggctctttc
gcagggctggcgaacttgcagaagttgtggatgatgcacgctcagatccagaccatcgag
aggaactcctttgacgaccttcagtccctggtggagctcaacctggcccacaacaacctc
accctgctgccccatgacctcttcacccccctgcaccgcctggagagagtccatctgcac
cataacccctggaactgtaactgtgacatcctgtggcttagctggtggctgaaggagaca
gtgcctgccaacaccagctgctgtgcccgctgccacaccccagccagctacaggggtcgc
tacatcggcgagctagagcacagctacttccagtgcgacgtgcctgtcatcgtggagccg
ccggcggaccgcaacgtcacagagggcatggcggctgagctcaagtgcagaacgagctcg
ttgacctcggtcagctggctcacccccaacgggtctctggtgacccacggggcgtacaag
gtgcgcctggccgtcctcaacgacgggacgttgaacttcaccaccgtcaccatgcaggac
acggggacttacacctgcatggtgagcaacacggcgggcaacatctctgcctctgccgtg
ctcaacgtcacctcggtggagaacagtggcgtcacctacttcaccacagtcaccgtggag
accacagagacagttgacgacagccagactcctgctcttccaccgattggctgggtatca
tcctcgaccaccagggggcctccagtccagaccaggaccacagagcggacctacaccgtc
tctgttctggacctggacggggagggggaccgcggcttggaggaggtgatgaagaccacc
aagatcatcatcggctgcttcgtggccatcacgctcatggcggccgtcttgctggtcatt
ttctacaagatgaggaagcagaaccaccagcaggaccccgatggccccgcctcctccatg
gaggtcatcacagtggaggaggagcttgccggtgtcgctgccatggagacccacttacac
ctgcccccattggagcattacaaccattacaacacttacagaagcacctaccaccactcc
cacacacaggaacctttactgattcaagccagctcaaaagacaatgtgcaagagacccaa
atttga
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