Oncorhynchus gorbuscha (pink salmon): 124033085
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Entry
124033085 CDS
T07892
Name
(RefSeq) iroquois-class homeodomain protein IRX-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124033085
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124033085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
124033085
NCBI-ProteinID:
XP_046200976
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Position
LG04:complement(5776167..5779813)
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AA seq
451 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGTTAFTSASPG
YNSHLPYSAEAGAAATFASYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPSKPTDKGDSTDTESDHKLLNPGDIVCDRFKEGNHGKET
DPLLSDSELKDQGDRTELLPESAKPTTSSPTAVPRGGTDLVAQDKPSEMGHAPCTVNSNV
TSVIHSSPSAPKPKLWSLAEIATSSDRCKSSSDGPQGHGMGHSTVITTNAASPSRSSPQC
PLPNSTVLSRPIYYTSPFYPGYTNYGSFGHLHSHSNHGSGTGSTAHFNGLNQTVLNRAEA
LVRESQKGRGQTQVDLCKDSPYELKKGMSNI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccatccgcttcgttggcgctgtattcatgc
ccggcgtacagcaccagcgttatatcgggacccaggaccgaagaacttggtagatcctca
tctggctcagcttttgctccctatgccggaactacggcgttcaccagcgcttcgcccggg
tacaactcccatctcccgtacagtgcggaggcgggagcggccgccacattcgcttcatac
gtgagttctccctatgaccacacgacgggaatggctgggtctataggatatcacccctac
gctgctcccctgggttcatacccctacggtgacccggcataccgaaaaaacgcgacccgg
gatgccaccgccactctcaaagcctggttgaacgagcaccgtaagaacccctaccccacc
aagggggagaagatcatgctggccatcatcaccaaaatgaccctcacccaagtttccacc
tggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggactccccga
aaccggagcgaggacgaggaggaagacgagaacatcgatctggaaaagaatgacgacgac
gagcctagcaagccgacagacaagggagactcgacagacacagagtcagatcataaattg
ctgaacccgggggacatagtgtgcgacagatttaaagaggggaatcatggcaaagaaacg
gatccccttctgagcgactcggaattaaaagaccaaggggatcggacagagttactgccc
gagtctgctaaacccaccacctcgtctccaaccgccgtgcctcggggaggaaccgatctc
gttgcgcaagacaagccgtcagaaatgggccatgcgccgtgcacggtaaacagcaacgtc
acgtctgttattcactcctccccatcggcccctaaacccaaactctggtccctggctgag
atcgcaacgtcctcagacaggtgtaagagcagcagcgacgggccgcagggccatgggatg
ggtcacagcacagtgatcaccaccaatgcagcgtcaccatcacggtcctccccacagtgc
cctctcccaaacagcacagtcctatccaggcctatctactacacgtcccctttttacccg
ggctacacgaactatggcagctttggacatcttcacagtcacagcaatcacggctcaggc
acgggctccacggcacatttcaatggattaaaccagactgtgttaaatagagcagaagct
ttggtaagagaaagccagaaaggcagaggccaaacgcaggtagatctttgtaaagactcc
ccttatgaactaaagaaaggtatgtcaaacatttaa
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