Oncorhynchus gorbuscha (pink salmon): 124033086
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Entry
124033086 CDS
T07892
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124033086 (irx3a)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124033086 (irx3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
124033086
NCBI-ProteinID:
XP_046200977
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All DBs
Position
LG04:6204772..6208209
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AA seq
461 aa
AA seq
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MSFPQLGYQYIRPIYPPERQGISNARAGTELSPSGALSNVLSTMYGSPFAAAAQGYGAFL
PYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTD
EEGNVYNSDHEEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHADLKLDGRSDSE
ISDGYEDLQGPDQRFLKAVVKEGKDIHVDRGEHFHHHHHHSFEIKASQPNGEQVKLNPVS
INSPPSENNAAPAQKPKIWSLAETATTPDNPRKSPQMNGSNTVGPAAQTIISPHHRLISC
PVGKIQNWTNRAFSAHQLALLNSNHYLGLANQASANGLALYSRQQHQHTQDKSHSSDTAV
TERSSALEAEKKLLKTAFHPVHRRPQNQLEAAMVLSALASS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgaccgatatacccaccggagcgccag
ggtatcagcaatgcccgagccgggacggagttgagcccgtccggggcactctcaaacgtt
ctctcaactatgtatggatcacctttcgccgcagcagcacagggctatggagcatttctg
ccctattcaaacgatatatcaattttcaatcaattgggtgctcagtatgagttgaaagac
agtccaggcgtacaaggacacccaggatttgcccaccatcacccagcgttttacccatat
ggccagtatcagtttggcgacccgtccagacccaaaaatgcgaccagggagagcacgagc
acactgaaggcctggctaagcgagcatcgtaagaacccctaccccaccaagggggagaag
atcatgctggccatcatcaccaaaatgaccctcacccaagtttccacctggttcgccaac
gccaggaggaggctaaagaaggagaacaagatgacctggactccccggagccgcacagac
gaagagggaaatgtttacaacagtgatcacgaggagggagaggaaggggacaagagggag
gatgaggaagagattgatttagaaaatatcgacacggaaaatatcgagaataaggacgac
ttggatgatcaggatgacctacacgctgatttaaaattagatggtagaagcgactctgag
atttcagacggctatgaggatttacaagggcccgatcagagatttctgaaggctgtagtg
aaggagggcaaagacattcacgtggaccggggcgagcacttccaccaccaccaccatcac
tcttttgaaattaaagcctcacaaccgaatggcgaacaagtgaaactgaatcctgtgtcc
atcaactcgcccccatcagaaaataacgcggccccggcccaaaagccaaagatttggtct
ttggcggagacagcaacaacccctgacaatccccgcaaatctccacaaatgaatggcagc
aacacagttgggcccgcggcccagaccataatcagccctcaccacagactcatctcttgt
cctgttgggaaaatccagaactggacaaaccgagctttttctgcccaccagctcgcatta
ctgaactctaaccattaccttggactggcgaaccaggcttcggctaacgggctcgccctc
tacagcaggcagcaacaccaacacacgcaggacaagagtcatagctcagacacagccgtc
acagagagatctagtgccttggaagcagagaaaaagttgttaaaaacagccttccaccca
gttcatagacggcctcagaatcaactcgaagcagccatggttctgtcagctctcgcctcc
tcctag
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