Oncorhynchus gorbuscha (pink salmon): 124033145
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Entry
124033145 CDS
T07892
Name
(RefSeq) cadherin-15-like
KO
K06809
cadherin 15, M-cadherin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124033145
04519 Cadherin signaling
124033145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124033145
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Major cadherins
124033145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Sde0182_C
OCD_Mu_crystall
Motif
Other DBs
NCBI-GeneID:
124033145
NCBI-ProteinID:
XP_046201060
LinkDB
All DBs
Position
LG04:complement(21245141..21264977)
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AA seq
811 aa
AA seq
DB search
MLAQEMASRGLAVLCVLVAGLGQVGSSGQAGREDLNPAALYPWRQRSSGGLSRVKRDWII
PPIRVLENSKQVPENLVQIKSDKIFTGEVIYKLEGPGVDQDPKDLFEIDDKTGWIRSMIP
LDREKYRSFTLKAFALSPSGERLENPSTIEIVVLDQNDNRPNFSQKEFAGSVYEFSVPGT
SVMSVTATDADDPTTDNAILSYSIIGQESIPLLRINKTMFGINNETGAIYTRDVGLDWEV
VKGFRLKLQVADMSGMGLTSLANAVIHVTDINNNPPRFSPDQYTMSAVENKIDFVIGWVN
ATDNDEPGTGNWETKYTIAKGNPSRNFAIRTDPVTNEGILSVVKALDYESQEVYTLTLTV
ENVNPLSIKAPKNPVSSATVVVTVVNENEAPRFIKDPIEILVPESVDPGTVLASNIAYDP
DNAKLKYDILRDPEGWLIINHETGEITARKPFNVRSPHVKNNIYNAVIRVTDTDAGGIST
TASLMITLRETNDFFPQLFPLMGTVCSESGRETSGLFLTAVDEDLPPHAEPFTFHLQDIN
VSANWTIIQVNETHAVLRPLVELETGEYAVTVLVTDSGTPSLSAYAQVNVTVCPCGKDSE
CKTEAAAIFGTRVGVSFIALLVIMASIALLLLLLLLAVAVGNCRRHHMKKGEGLLVGDSD
EDIRDNVLNYDEQGGGEEDENAFNIDLLRNPTDVGPLPISYYPPVSGIPRGKQPLRKDYP
DNLPSPSYPRKPPADPTDIEDFINDGLEAADHDPNIPPYDTALIYDYEGDGSLAGSLSSI
ASASSDGDQDYDYLNDWGPRFKKLANMYDPR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgttggcacaggagatggcatcaagggggttggcagtgctgtgtgtgctggtggctggc
cttggtcaggtcgggagcagtggccaagcgggcagggaggacctgaacccagcggccctg
tatccatggagacagaggagcagtgggggtctgagcagggtgaagcgggactggatcatc
cctccaatcagggtactggagaacagcaagcaagtccctgaaaacctggtccagatcaaa
tcagacaagattttcactggagaagtgatctacaagctggaaggaccaggggttgaccag
gaccctaaggacctgtttgagatagacgataaaacaggctggatcaggagcatgattccc
ctggacagagagaaatacagaagcttcacgctgaaagcctttgccctgtcgcccagtgga
gagagactggagaatccctccaccattgagatcgtagtgctggatcaaaatgataaccgg
cccaacttctcccagaaagagtttgctggatccgtttatgaattctccgtaccaggcaca
tctgtgatgtctgtgactgcgactgatgctgacgacccaaccacagacaacgctatcctg
agctactccatcattggccaggagagcatcccgcttctccgcatcaacaagaccatgttt
ggcatcaacaacgagacaggggccatttacacacgagacgtgggtctagactgggaggtg
gttaaaggctttaggttgaaactgcaggttgctgacatgtcaggcatggggttaaccagt
cttgcgaatgcagtcatacatgtgactgacatcaacaacaaccccccacgattctcccca
gaccagtacactatgtcagctgtggagaacaaaatagactttgtgattggctgggtcaac
gccacagacaatgatgagccagggacaggaaactgggagacaaaatacaccatcgccaag
ggcaacccctctaggaactttgccattcgcacagaccctgtgaccaacgagggtattctg
tcagtggtgaaggctctggactacgagtcccaagaggtgtatactctgactctgacagtg
gagaatgtgaaccctctcagcatcaaggcccccaagaaccctgtaagcagtgccacagtg
gtggtgaccgtggtgaatgagaacgaggccccacgctttattaaagaccccatagagatc
ttggttcctgagtctgtggaccctggcaccgtgctggccagtaacatcgcctacgatccc
gataatgcaaaactcaagtatgacatactcagagatcctgagggatggcttataatcaat
cacgagactggagaaatcacagccaggaaaccgttcaatgtccgctcccctcacgtcaag
aacaacatttacaatgcagtcatcagagtcacagacacagatgctggtggaatctcgacc
acagcgtctctgatgatcacgttgcgggagaccaatgacttcttccctcagctgttcccc
ctgatggggacggtgtgcagcgagtcaggccgggagacatctggtctgttcctgactgct
gtggatgaggacctgccccctcacgcagaacccttcaccttccacctgcaagacattaat
gtgtctgccaactggaccatcatacaggtcaatgagactcatgcagtgctgcgacccctg
gtagagctggagacaggggaatatgctgtcactgtgttggtgactgactctgggacccca
agtctcagtgcatatgctcaggtcaatgtgactgtgtgtccgtgtgggaaagacagtgaa
tgcaagaccgaagctgctgccatattcggaacacgagttggtgtcagcttcatcgcctta
ctggtcatcatggccagcatcgcactcctgctgttgttgctactcctggctgtagccgtg
ggtaactgcagacggcatcatatgaagaaaggagaagggctgttggtgggggattcagac
gaagacatccgtgacaacgtcctgaactatgacgagcagggtggtggagaggaggatgag
aatgccttcaacattgacctactgaggaacccaacggatgtgggaccactcccaatatcc
tactaccctcccgtctctggcatccccaggggaaagcagccactcaggaaagactaccca
gacaacctgccctccccctcgtatccacggaaacccccagcggaccccactgacattgag
gacttcatcaatgatggcctggaggcagcagaccatgaccccaacatccctccctacgac
acagctctgatctatgactacgagggtgatggctccctggcaggcagcctgagctccatc
gcctcagccagctcagacggcgaccaggactatgactacctcaacgactggggaccacgc
tttaagaaactggccaacatgtacgacccacgctaa
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integrated database retrieval system