Oncorhynchus gorbuscha (pink salmon): 124033229
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Entry
124033229 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: lipoxygenase homology domain-containing protein 1-like
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124033229
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124033229
Cilium and associated proteins [BR:
ogo03037
]
Other cilia and associated proteins
Stereociliary proteins
124033229
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Other domain-containing proteins
Others
124033229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
Motif
Other DBs
NCBI-GeneID:
124033229
NCBI-ProteinID:
XP_046201155
LinkDB
All DBs
Position
LG04:42873286..42919687
Genome browser
AA seq
2202 aa
AA seq
DB search
MSYTPAVYEVVTITGDERGAGTDANVFITLFGEYGITPKVHLASKSRTAFEKNKTDVFRI
KTHNVGPLKKIRIEHDNTGLNASWFLDRVVVTDITRPHLRFYFTCNNWLSKVEGDNLFVR
DLLGSLDPMDLPKYNKYVVSVFTADVKGSGTDADVFINIFGEFGDTGERRLDNKNDNFEK
STEDKFTLEAPHLGKIRKITLGHNNKGSSAGWFVDKVLLDDMGNKSLYEFPINRWFAIDE
DDGKIQRDILVGGNEPTGIVYHVQVVTGKVRGAGTNSNIHMLMHGTKGLKNSGKIFLQGG
KFERGLTDIFNVEISALLSPLSRVTIGHDNGGVSAGWYCEKIVVFCPFTGIEQTFPCSKW
LDESEGDGLIERELYEMVSLRQRKQKKHPWSLWIWTSDLPGAGTDASVYFQIYGEKGKSD
EMRLDNKADNFEQGQLDKFMVELPDLGKLTKCRIWHEKRSPFAGWHLSKASLMKTLIKEK
FKFPCERWLDTNEDDNELVRELPATGDLIAEPLPLIKYRVTVCTGKFGGSGTDATVFLNL
IGDLGDTGERTLVNCKNNVNKFEKGNMDEFIIEAVSIGQVRRVRIGHNGRGGGCGWYLEK
VMVREEGQAESQVVEFPCGRWLDRNEDDGQIVRELVPFSDGQRLYNVSYHVSVKTGSVSG
GSSNSTVFVKLYGEKGDTSKMMLVVSDNNLSNYFEVGRVDVFTVETFDIGQISRLMIGHN
NEGMNAGWFLDSVQIMVPASGSQYMFPSHRWLCKDEADGKTEVVIYPSEILDIKQLINYE
ITVVTGDVSFAGTNANVFIQIYGGKGKTEVVNLASRSNNYERATTEIFKIEASNVGKIFK
VRIGHDEAGIGSGWFLEKVYVKHLIMGMVTKAKKKDDKKKKKKKKVNQIFFQFPVLCNIR
LSQXNALFYSQEAEEETEEVMQEIVQTYVFPCSRWLSRGEEDGELVVELLPEDTDQLEEN
TYEVCVFTGDMLGAGTDANVYINIYGENGDTGERLLRKSGNLNKFESGQEDVFTITAIEL
GPLRKLRIRQDNAASYSSWYLDRVEIVDTKDDTTYYFPCNRWLAVDEDDGQIARELVPVD
EAFMKRDDDEEGTGAATLGLEQKAMSTTLALKIKTGEKKNAGTDANVFAIIYGEKDDTGI
INLKACKTHKNKFEQGMVDEFTVEAVDLGELEKLRIGHDNSGGSPGWFLDWVEIDXPSQG
QRLRFPCGRWLDNGEDDGAIVRDLYPNELQTELYMPFVPYEIKMYTSDVFGAGTDADVFI
VLYGWKGLCTQQKHLCVNKRERRLFFERGAEDMFIVELEDVGDVIEKIRIGHDNSGTNPG
WHLDRVEIRRLLRKGKGSETTILPCERWLAKSEDDGETVRELVPSDIITEKLLKEGKLKH
TEMEVEDALETHTYKVSVRTGDMYGGGTDAKVFLTIYGDLGDTGERRLSKSESNSNKFER
GAVDKFSIEAVDLGQVFKIRIRHDNSEFMGTDWYLDQVEVMDMETEEVYMFLCERWLSKK
KEDKRIERTFYVKDYEGERNVDPNKKSTQAKTGLDRNANKKKKKKAVLEEGPVIPYHFTV
STAMDPDASTTARVYVIVMGPNDIETERLWLDLPEGKKSFAAGTMENFQCYGTDVGEIKR
VELGHNGATPESCWLVDELSVAVPTKGIKYIFQCKCWLAKDRGDGLTGRLFNVLDANSIN
IVRKIIYVATVITGDIQDAGTDTNIFLSVFGANGCTEEMLLPKNEDRFERGQEDTFNLEI
DDIAPLKKIRVRIDGSGSRPDWFLDRIVMHNLTTEEVSVFTNENWLSKTKGPKRTKICEL
AAVVDGEEMVERTTYIIQVQTSDIGGAGTDANVFLIVFGENGDTGTLALKEGGSRNKFER
KSKDVFRFPDILSLGELSKIRVWHDNKGPAPGWHLEYIDVKDETMDQNFRFPCGRWLAKN
VDDGQIMTELACANNDILDFSDKTKYEIATTTANTDDADTKENVWIVLEGKRGRSKEFVL
ENSSKKKRFLCGATDTFEFSSKHVGEIAGICVGHTTKDSKKVKGEAFWHVLEVVVTEKGL
GNKYLFHCDAQIPLAAKRDKFLTFECFKTIESFASKVRSLVPVKYEIIVITGDVKRAGTD
SNVYITIYGSNGDSGKRSLKQKFRNLFERGQTDHFILEMLDLGELLRVKVEHDGSSHNSG
WYLECVEVTNTANSVTTIFLCGKWLDLQKADGQIQRVLYPKY
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacacccctgcagtttatgaggtggtgaccatcactggagatgagaggggggcg
ggcaccgatgccaacgtgtttatcactctcttcggggaatatggcatcactccgaaggtg
catctggctagcaagagtagaacagcctttgagaagaacaaaacagacgtctttaggatc
aaaactcataacgttgggcctttgaagaagatacggatagaacatgataacacaggtctg
aatgccagctggttcttggacagagtggtggtgactgatattacaagacctcacctgagg
ttctacttcacctgtaataactggctcagtaaagtggaaggggacaacctgtttgtcagg
gatctgctgggcagcctcgaccccatggacttgcccaaatataataagtatgtagtgagc
gtgttcacagcagatgtaaaaggcagtggaacggatgctgatgtcttcatcaacatcttt
ggagagtttggtgacaccggtgagaggcggttggacaataagaatgataactttgagaaa
agcacggaggacaagttcactttagaagctccccacctcggcaaaattaggaagattacc
ctgggtcacaacaacaaaggctcttccgctggatggtttgtggacaaggtgctcctggat
gacatgggaaacaagtctctgtatgagttccccatcaaccgctggttcgccatcgatgag
gatgatgggaagattcagagggacatcctagttggaggcaatgagcccacaggtattgtg
taccacgtccaggtggtgacagggaaggtccgaggagctggcaccaactccaacatccac
atgctgatgcacggcaccaagggcctgaagaacagcggcaagatcttcctgcaggggggt
aagtttgagcgtggtctgacggacatctttaacgtggagatatctgccctgctcagcccc
ctcagccgagtcaccatcggccacgacaatggaggagtcagcgctggctggtactgcgag
aagatagtggtgttctgcccgttcacagggatcgagcagaccttcccttgcagtaaatgg
ctggatgagagtgaaggtgacggactgatagagagagagctctatgagatggtctcacta
aggcagaggaaacagaagaagcacccctggtctctgtggatctggacgtcagatctccct
ggcgcaggaacagacgcatccgtttacttccagatctatggggagaagggcaagtcagac
gagatgagactggacaacaaagcagacaactttgaacagggccagctggataagttcatg
gttgagctacctgacttggggaagcttacaaaatgtcgcatctggcatgaaaagagaagc
ccttttgcagggtggcatttgagcaaggcatctctgatgaaaactttgataaaggagaag
tttaagttcccctgtgagcgctggctggatactaacgaggatgacaacgagttagttaga
gagctgcctgccactggagacttgattgctgaacccctgcccttgataaagtaccgcgtg
actgtgtgcacggggaagtttggcggcagcgggacggacgccactgtcttcctcaatctg
attggtgacctgggggacacaggcgaacgtacgctggtcaactgcaaaaacaacgtcaac
aagtttgagaaaggcaacatggatgagttcattattgaggcggtgtcaatcgggcaggtg
cggcgtgtgcgtatcgggcacaacgggcggggcggaggttgtggctggtacttggagaaa
gtgatggtcagggaagagggacaggctgagtctcaggttgtagagttcccctgcggcagg
tggctagatcggaatgaggatgacggacagattgttcgggagttggtgccattttcagac
ggccagcgtctttacaatgttagctatcatgtgtcggtgaagacaggcagcgtcagtgga
ggcagctcgaactccaccgtttttgtgaagctgtatggggagaagggagacaccagtaag
atgatgctggtggtctctgacaacaacctgagcaactactttgaggtgggccgggtggat
gtgttcactgtggagacgtttgacattggacagatcagccgtctgatgattggccacaac
aacgaggggatgaatgctggttggttcctggacagtgtccagatcatggtgccggccagt
gggagtcagtacatgttccccagccaccgctggctctgtaaggacgaggcagacggcaag
accgaggtggtgatctaccctagcgagatcctggacattaaacaattgataaactatgag
ataacagtggtgacaggtgatgtgagctttgctggaaccaacgctaatgttttcatccag
atctacggtggtaagggcaagacagaggtcgtcaatctggccagcaggtccaacaactat
gagagagcaactactgagatattcaagatagaagccagcaacgtaggaaagatcttcaag
gtgcgtatcggccatgatgaggcggggatcggctccggctggttcctagagaaggtatat
gtcaaacacctaatcatgggcatggtgaccaaggcgaagaaaaaggatgacaagaagaag
aagaagaaaaagaaggtaaatcaaatattttttcagtttcctgtactttgtaatatcaga
ctttctcaanntaacgctctattctattctcaggaggcggaggaggagacagaggaagtg
atgcaggagatagtgcagacatatgtgttcccctgctcccgctggctgagccggggggag
gaggacggggagctggtggtggaactgcttcctgaggatacagaccagctggaagagaac
acctatgaagtgtgcgtcttcaccggggacatgctgggggctgggactgacgccaatgtc
tacatcaatatttatggggagaacggggacacaggggagcgcctcctcaggaagtcaggc
aacctcaataaatttgagtcagggcaggaggatgtgttcaccataacagccattgagctg
ggccccctacggaagctacgcattcgtcaggacaacgcagcgtcttactcctcttggtac
ctggatcgtgtggagatagtggacaccaaggatgacaccacgtactacttcccatgtaac
cgttggctggcggtggatgaggatgatggacagatcgccagggagctggtgcccgtggat
gaggccttcatgaagagggacgatgatgaggaggggacaggtgcagctaccctggggctt
gagcagaaagctatgtctacaactctagccctgaaaataaagacaggagagaagaaaaat
gctggaacggatgccaatgtttttgctatcatttatggagaaaaagatgatacagggata
atcaacctgaaggcgtgtaagacccataagaacaagtttgagcagggcatggtggatgaa
ttcactgtggaggctgtggacctgggagagctggaaaagctacgcatcggccatgacaac
tcaggtggctctcctggttggtttctggactgggtggagatcgatngcccctctcagggc
cagagactccgtttcccatgtggccgttggctagataatggagaggatgatggggccata
gtgagagacctgtaccccaacgagcttcagactgaactctacatgccatttgtcccctat
gagatcaagatgtacacaagtgatgtgtttggtgctgggacagatgcagacgtgtttata
gttctttacggctggaagggcctctgcacccagcagaaacacctgtgtgtcaacaagcga
gagagaaggctgttcttcgagagaggagctgaggatatgtttatcgtggagttggaggat
gtgggtgatgtcattgagaagatccgtattggacacgacaacagcggcaccaaccctggc
tggcaccttgacagagtggagatcagacgcctactcaggaagggaaagggttcggagacg
accatcttaccgtgtgagcgctggttggccaagtcagaggacgatggggagacggtgaga
gagctcgttccctctgatattatcacagagaaactgctgaaggaaggaaaactgaaacac
acagagatggaggtggaggatgcccttgaaactcacacctataaggtgtctgtgagaacg
ggtgacatgtacggaggagggaccgacgccaaagtgtttctcaccatctacggagacctg
ggagacacgggggaacgcagactcagcaagtctgagagcaacagcaacaagtttgaaaga
ggggcggtggataagttctccatcgaggcggtggatcttggccaggtgtttaagatccgt
attcgccacgacaactccgaatttatggggacagactggtacctggaccaggtagaggtg
atggacatggaaacagaggaggtatatatgttcctgtgtgagcgttggctttccaagaag
aaggaggacaaacgtatcgagagaaccttctacgtcaaggattatgagggtgagaggaac
gttgatccaaacaagaagagcacccaggccaagacagggctggacaggaatgcaaacaag
aagaagaagaaaaaggcggtcttagaggaaggtccagtcatcccctaccacttcactgtg
tctactgctatggaccctgacgccagcaccacagccagggtttatgtcatcgttatggga
cccaatgacattgagacggagcgtctgtggctggacctgcctgaggggaagaagagcttc
gccgcagggaccatggagaacttccagtgttacggaactgacgtgggagagatcaagagg
gtggagctgggtcataatggggcaaccccagagagctgctggttggtggacgagttgtcg
gttgctgtgccgaccaaaggcatcaagtacatcttccagtgtaagtgctggttagccaag
gacagaggagacggtctcaccggcagactgttcaacgtactagatgccaacagcatcaat
atcgtccggaagatcatctatgtggccacggtcatcacaggcgacatccaggatgcaggg
acggacaccaacatcttcctgtctgtgtttggagccaatgggtgcacagaggagatgctg
ctgcccaagaatgaggacaggtttgagagaggtcaagaagacacgtttaacctggagata
gatgacatcgctcctctgaagaagatcagggttcgcatcgacggctctgggagtcgccct
gactggttcctcgacaggatcgtgatgcataacctgaccacagaggaggtgtctgtgttt
accaatgagaactggctgtcgaagaccaaagggcccaaaaggactaagatctgtgagctg
gcagcggtggtggatggagaggagatggtggagaggaccacctacatcatccaggtccag
acaagtgacatcggaggcgcgggcactgatgccaacgtgttcctgatagtgtttggggag
aacggagacactggtacgctggcactaaaggagggaggtagcagaaacaagtttgagcgg
aagtcaaaagatgtgttccgcttcccagacatcctcagcctgggagagctttccaagatc
cgcgtatggcatgacaacaagggtcctgctccgggttggcacctggagtacattgatgtg
aaagatgagaccatggaccagaatttccgtttcccatgtggccgctggctggccaagaat
gtggacgacgggcagatcatgacagagctggcctgtgccaacaacgacatcctagacttc
agtgacaagaccaaatatgaaattgccacaacaacagctaacactgatgacgcagacacc
aaggagaatgtgtggatcgtgctggaaggaaagaggggacgttcaaaggagtttgtgcta
gagaatagttcaaagaaaaagaggttcctttgtggagccacagacacgtttgagttttcc
tccaagcatgtgggtgagatagctggcatctgtgtgggacacacgactaaagacagcaaa
aaggtgaagggtgaggccttctggcacgtcctggaagttgtggtgacagagaagggactt
ggaaacaagtatttattccactgtgatgcccagatccctctagcagccaaacgggacaag
tttctgaccttcgaatgctttaagaccattgagagctttgccagcaaggtccgcagcctc
gtacccgtcaaatacgagataattgtcatcaccggcgacgtcaaaagggccggaactgac
tctaacgtttacatcaccatatatggttccaatggggattctggaaagcgttccttaaag
cagaagttccgaaacctttttgagcggggacaaactgatcattttattctggagatgttg
gatttaggggagctgctgagggtcaaagttgagcatgatggctcaagccacaactctggt
tggtacctggagtgtgtggaggttaccaacacagccaactcggtcaccactatcttcctg
tgtgggaagtggttggatcttcagaaggcagatgggcagatacaaagagtgctctacccc
aaatactga
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integrated database retrieval system
