Oncorhynchus gorbuscha (pink salmon): 124033274
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Entry
124033274 CDS
T07892
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03022
Basal transcription factors
ogo03420
Nucleotide excision repair
ogo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124033274 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
124033274 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124033274 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124033274 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124033274 (cdk7)
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124033274 (cdk7)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124033274 (cdk7)
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
124033274 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
124033274 (cdk7)
Protein kinases [BR:
ogo01001
]
Serine/threonine kinases: CMGC group
CDK family
124033274 (cdk7)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124033274 (cdk7)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
124033274 (cdk7)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124033274 (cdk7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
124033274
NCBI-ProteinID:
XP_046201212
LinkDB
All DBs
Position
LG04:complement(51354250..51360672)
Genome browser
AA seq
345 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTNDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAFIVM
TLQGLEYMHHHWVLHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRLPFLAGDSDLDQLSKIFEALGTPTDDTWPGM
SSLPDYVSFKLFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRLTATQALKTRYFSNRPA
PTPGHQLPRPNSSAEALKEKENLTIGIKRKRDGLETSTIKKKLIL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtaaagtcccgagcaaaaagatatgaaaaactagattttctgggagag
ggtcagtttgccactgtttacaaagccagggacaagaccaacgacaccatagttgccatc
aagaagatcaaagttggacacagaacagaggctaaagatggcatcaacaggacagcccta
cgagagattaaactactgcaggagttaagtcacccaaacattattgggctgcttgatgca
ttcgggcacaaatctaacatcagcttggtgtttgactacatggagacagatctggaggtg
atcatcaaagataccagtctggttttgactccagccaacatcaaagcattcatagtgatg
actctacagggcctggagtacatgcaccaccactgggttctgcacagggatctgaagccc
aataacctgctgctggatgagaatggtgtgttgaagctggctgattttggtttagctaaa
gccttcggcagccctaacagagtctacactcaccaggtagtcaccaggtggtatcgttct
ccagagttgttgttcggtgccaggatgtatggggtgggcgtcgacatgtgggctgtgggc
tgcatccttgcagagctcctcttaaggttacccttcctagctggagactcagatcttgac
cagctgagtaagatatttgaagctctggggactccgacagatgacacctggcctgggatg
agtagtctacctgactatgtgtcgtttaagttgtttcctggtactcctctggaacacatc
ttcagtgctgcaggagatgacctcttagagctactacagggtctattcaccttcaaccct
tccacacgccttacagctacacaggctctaaagacgaggtacttcagtaacagaccagct
ccgacccccgggcaccagctgcccaggcccaactcatcagcagaggctctcaaagagaag
gagaacctcaccatcggaatcaagaggaaacgagacggactggagacgagcaccataaag
aagaaactgatactgtga
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