Oncorhynchus gorbuscha (pink salmon): 124033314
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Entry
124033314 CDS
T07892
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00061
Fatty acid biosynthesis
ogo00071
Fatty acid degradation
ogo01100
Metabolic pathways
ogo01212
Fatty acid metabolism
ogo03320
PPAR signaling pathway
ogo04146
Peroxisome
ogo04216
Ferroptosis
ogo04920
Adipocytokine signaling pathway
Module
ogo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124033314
00071 Fatty acid degradation
124033314
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124033314
09143 Cell growth and death
04216 Ferroptosis
124033314
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124033314
03320 PPAR signaling pathway
124033314
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ogo01004
]
124033314
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124033314
Enzymes [BR:
ogo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124033314
Lipid biosynthesis proteins [BR:
ogo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124033314
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of breast milk
124033314
Exosomal proteins of breast cancer cells
124033314
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124033314
NCBI-ProteinID:
XP_046201261
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All DBs
Position
LG04:56568108..56581945
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AA seq
717 aa
AA seq
DB search
MHFQEWLQSLRTSGGVRGPENKDFWSLVPSLPLSSSFSFPSLSLSPSSLLGIGALASFTA
YWLVTRPRPMRPPCDLNAQSIPVQGEPNWRRSALLKDDVLLEFYYDDTRTAYDMFQRGLR
VAGDGPCLGFRKPGEPYQWISYTEVAEQAQVLGSGLLGKGCQPNPEQLVGIFAQNRPEWI
ISELACYTFSMAVVPLYDTLGEEAMVHILNLAEISLVICDKEEKAESLLGNKEKGVTPTL
SCLVLFNPCSDAIVERGKNCGVEILELTQLMELGRQNLKDPAPPQPQDLAVVCFTSGTTG
KPKGAMITHGNIASNSSSVIKILEGSFVIQQEDVSISYLPLAHMFERMIQVSMLCHGARV
GFYQGDISLLMDDIKTLKPTFFPVVPRLLNRIYDKILGSVTSPLRRAVLHYAVRRKQAEL
SSGVVRNNSLWDRLVFNRIQANLGGNLRFILTASAPISPTVLSFLRATLGCLIFEGYGQT
ECTAGCTFSMPGDWSAGHVGAPLPCAMVKLIDIPDMNYYAKNGEGEICIRGHSVFRGYLK
DEEKTTEALDRDGWLHSGDVGQWLPNGTLRIIDRKKHIFKLSQGEYIAPEKIENVYMRCV
PVLQVFVHGDSLQSHLIGIVVPDPEVFIDWVKKRGIVGSYEELCQNPDVKKEVLEDMTAV
GKEAGLKSFEQVKDLHLHPEMFSVSNGLLTPTLKTRRVDIHRVFQEQITNMYSTTAI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcaggagtggttacaatcacttcgtaccagtgggggggttcgaggacctgaa
aacaaagacttctggagccttgtcccctctctccctttgtcgtcctctttctccttcccc
tccctctctctatccccgtcctctctgctgggtataggggctctggcctccttcactgca
tactggctggtgactcgccctcggcccatgcgccccccttgtgatctgaatgcccagtct
atccctgtacagggagagcccaattggaggcgttcagctttgctcaaggatgatgttctg
ttggagttctactatgatgacaccaggacagcctatgacatgttccagagaggactgaga
gtggcaggggatggcccatgccttggctttaggaaacctggggaaccttaccagtggata
tcctacactgaggtggctgaacaggcacaggtgctgggctctgggcttttgggcaaaggc
tgccaaccaaaccctgagcagttagttggaatatttgcccagaacaggccagagtggatc
atttcagagctggcctgctacaccttctcaatggctgtggtgcccctgtatgacacactt
ggagaggaggccatggtgcatatcctcaacctggctgagatctccctggtgatctgtgac
aaggaggagaaggcagagtcccttctggggaataaggagaagggtgtgactcctactctc
tcctgtctggtgctcttcaatccctgcagtgatgccatagtggagagggggaagaactgt
ggagtggagattcttgaactcacacagctcatggaacttggacgacagaacctcaaagat
cctgcgccaccccaaccccaggacctggcagtcgtgtgcttcaccagtggaaccacagga
aagcccaagggagccatgatcacccacggcaacatcgcctccaattcctcctctgttatt
aagatcctggaggggtcatttgtaattcagcaagaggacgtgtcaatatcttacctgcct
cttgcccacatgtttgagaggatgattcaggtgtccatgctatgtcatggggccagggta
ggattctaccagggggatatctccctgctcatggatgatattaagactctgaaacccacc
ttcttcccagtggtgcctcgcctactcaaccgcatctacgacaagatcttaggctccgtg
acgtccccattgcgccgggcagtgctgcactatgcagtgaggaggaagcaggctgagctc
agcagtggggtggtacgtaacaacagtctgtgggacaggctggtgttcaacaggattcag
gctaatttaggaggtaatctgaggttcatcctgaccgcctcggcccccatctcccccacc
gtgctctccttcctcagggccaccctcggctgtctgatctttgagggctacggtcagact
gaatgcacagcaggctgcaccttctccatgccaggtgactggagtgcaggccatgttggt
gctccattgccctgtgccatggtgaagttgattgacattcctgatatgaactattatgcc
aagaacggagaaggagagatctgtatccgtggccacagtgtgttccggggatacctgaaa
gatgaggagaaaacaacagaggccctggaccgtgatggctggctgcacagtggagacgtg
ggccagtggctaccgaatgggacacttcgcatcatcgacaggaagaagcacatcttcaag
ctgtcccagggagagtacattgcccctgagaagattgagaatgtctacatgcgttgtgtc
cctgtgctacaggtctttgtgcacggagacagcctacagtctcacctgatcggtattgtt
gtgccagacccagaagtgttcattgactgggttaagaagaggggaatcgttggatcctat
gaggaactctgccagaatccagatgtgaagaaagaagtgttagaagacatgacagccgtg
gggaaggaagctgggctgaagtcatttgagcaggtgaaggacctgcacctgcatccagag
atgttcagtgtgagcaacggtctcctcacccccactctgaagaccagacgagtggacatc
cacagggtcttccaggaacagatcacaaacatgtatagcacaacagccatctag
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