Oncorhynchus gorbuscha (pink salmon): 124033320
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Entry
124033320 CDS
T07892
Name
(RefSeq) leucine-rich repeat LGI family member 3-like isoform X1
KO
K19999
leucine-rich repeat LGI family member 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124033320
Membrane trafficking [BR:
ogo04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
124033320
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_1
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
124033320
NCBI-ProteinID:
XP_046201271
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Position
LG04:complement(57037223..57053507)
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AA seq
563 aa
AA seq
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MWHECGVWRQRGNMLDAGSRRVPEWLRLLAGLSLLLCLVGETGAKRVPKIPRCPVTCSCT
KDSAFCVDTKAIPKSFPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTVVADD
AFAGLAHLQYLFVENNDVQALSKHTFRGLKSLTHLSLSNNNLQFLPRELFKYLDILTDLD
LRGNSFRCDCKIKWLVDWMEKTNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVY
ETFPFQSVSVESYEFNNNQFVAFAQPDTGFCTLFVWDHVEMVFRMYHNITARSAVYCKPV
VINNTLYMVVAQLFGGSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDDEWYFAVA
DSSKAGSTSIYRWNSNGFYSHQSLHPWHRDTHVEFLDVEGKQRLILSSASQPPVVYQWNR
SLRQFAFHSQITETFDVQMVKHFWVRNVLYLCLTRFIGDSKILRWEGQRYVEIQTLPSRG
SMAVYPFTVGPRQYLLLGSDFSFSRVYLWDDLTQRFQPFQELNMRAPRAFSLVSVDNKDM
LLAASFKGNTLAYQHLIVDLSAK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatgaatgtggtgtgtggcggcaaagaggaaatatgctggatgccggatcgaga
agggtcccggaatggctgaggctgttggccggcctaagtctgcttctctgcctggtgggg
gagacaggggccaagagggtccccaaaatcccccgttgtcctgtcacctgctcctgcacc
aaagacagtgccttctgtgtggataccaaggctatccccaagagctttccccctgggatc
atctctctgacaatggtgaatgcagccttcactacaatcccagagggagccttctcccac
ctgcacctgctgcagttccttcttctgaactccaataccttcactgtggtggctgatgat
gcctttgcaggtctggcacacctgcagtacctatttgtagagaacaatgacgtccaagcc
ctgtcaaagcataccttcagagggcttaaatccttgactcacctttctctgtcaaataat
aacctgcagttccttccacgagaactcttcaaatatcttgatattttgacagacttagac
ctgcggggtaactcattccgctgtgactgtaaaatcaagtggctggtggactggatggag
aagaccaacacctctgtccctgccatctactgtgccagcccatttgagttccaaggtcgc
agaatccatgatctcaccccacgagacttcaactgtatcagtgcagactttgccgtttat
gagacttttcccttccagtctgtgtcagtggagtcctatgaattcaacaacaatcagttt
gtggccttcgcccagcctgatactgggttctgtacactgtttgtatgggatcatgtggaa
atggtcttccggatgtaccataatataacagctcgctccgctgtctactgcaagcctgtg
gtcataaacaacactctttacatggttgtggctcaactttttggaggatcccacatctac
aagtgggaagaggacccacagcgatttgtgaagattcaggacattgacaccacacgtgtg
aggaaacccaactttgttgagaccttccagctggatgatgagtggtactttgccgtggca
gacagttccaaggcaggctctacgagtatataccgctggaacagcaacggtttctactcc
caccaatcccttcatccctggcatcgtgacacccatgtggagttcctagatgtggaaggg
aagcagcgtctcattctctccagtgcctctcagcccccagtggtttaccagtggaaccgc
agcctgcgccagtttgcctttcattcccaaatcactgagactttcgacgtgcagatggtc
aagcatttctgggtgcgcaacgttctctacctttgccttacacgcttcattggtgactcc
aagattctccgatgggaggggcagcgctatgttgagattcagaccctgccctcacgtggc
tccatggctgtgtatccattcactgtgggcccccgccagtatcttctcctagggagtgat
ttctccttctctcgagtttacctgtgggatgacctcacccagcgcttccagcccttccag
gagctcaacatgagagcaccccgggccttcagcttggtgtctgtggacaacaaagacatg
ctgctggcagccagctttaaaggcaacacactagcctaccagcacctaatagtggatctc
agtgccaaatag
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