Oncorhynchus gorbuscha (pink salmon): 124033504
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Entry
124033504 CDS
T07892
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124033504 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
124033504 (efl1)
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
Pre-60S particles
GTPases
124033504 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
WH2_Lhr
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
124033504
NCBI-ProteinID:
XP_046201476
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All DBs
Position
LG04:complement(988838..1086945)
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AA seq
1156 aa
AA seq
DB search
MGHTSLDKIKALQKNPANVRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYASGENDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIMELKLTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEDRAVKEERAEEDKEEGDIEPAECPGSEQVYDWSAGLEDSDDSLLYFSPDQGNV
VFASAIDGWGFSIQQFAQIHSQRMGIRAEVLLKTLWGDFYLNAKAKKIMKGAHAKGKKPL
FVQLVLDNIWSLYDAVVTRRDKEKIEKMMMSLGVKVMTRDSRHSDPKVLLSAICSQWLPV
SQAVLFMVCDKLPSPLDMTSERIERLMSVGARRFHSLPLQTQELKTAFMQCSSDDTAPVI
VFVSKMFMVEAKALPQNKQRPLTQEEMAQRRELARRRHTERLAAIQQTESGEGNAQSGST
TPATTPGGDITIGSEGVSGQIQGLPLKAKPEEEEGKETFVAFARVYSGVVRRGQKVFVMG
PKYDPAQGLRMLPEGSTSVSACLPPVPHLACCTMDSLYLLMGRELEELEEVPSGNVLGIG
GLEECVLKSATLSTSPALPPFIPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPC
AEVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVIRPPKVDMVN
EDLGKQQKVAVIHQVKESDTLHLDPSGLVTLTTPNRQATVGVRAIPLPEEVTLLLEGSAD
LIRTLEQAGQAQREGRTLDMSTWTLDALMVLKSRLEVLLQGRKWRNAVDRIWAFGPRRYG
PNILLNSVEGYQRPSVWHCLEREKGEKEGGAKAEASAIRDFDNSVVSGFQLATLSGPMCE
EPLMGVCFSVERWDMNFPTQRTHLDSVTEEDSNSLDASVSESPGEAAGQQVASGKAGGAG
ETPSQAEGAVAGASQGRRRAEVVAGLVDCYGPFSGQLIAAVKEACRHAFQAKPQRLMAAM
YTCEIMATAEVLGRVYGVLGKREGRVLQEEMKEGTEMFIIKAVLPVAESFGFADEIRKRT
SGLASPQLIFSHWEVISSDPSWVPTTEEEYLHFGEKADSANQALKYMNGVRRRKGLYVEE
KIVEHGEKQRTLSKNK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagtttggataagatcaaagcactacagaagaatccagccaacgtcagg
aacctgtgcattctggcacacgtggaccatggcaaaacaactctggcagatagcttggtg
gccagcaatggcattatatcaagtcgcttagccggaaagctgaggtacctggacagtcgg
gaggatgagcagatccgagggatcacgatgaagtccagcgccatctcactgcactatgct
tctggggagaatgactacctgataaacttgattgactctccgggccatgtggacttctcg
tctgaggtgtccaccgccgtcagactatgtgatggggccattgtcatcgtagatgctgtg
gagggagtttgtccacagacccaagcagtgctgcgtcaggcatggctggagaacatcagg
cctgtgctggtgatcaacaagattgaccggctcatcatggagctgaagctcacctctcag
gaagcctacacacacctgcagaagattctagaacaggtgaatgcagttacaggctctctg
tttacctccaaagtgctggaggaccgcgcggtgaaagaggagcgggcggaggaagataag
gaggagggggacatcgagcctgctgagtgtcccgggtcagagcaggtgtacgactggagc
gccgggctagaggattcggatgactccctgctctacttctctccagaccaggggaatgtg
gtcttcgccagtgccatagacggatggggcttcagtatccagcagtttgcccagatccac
agccagaggatgggcatcagggctgaggtgctcctgaagactctctggggagacttctac
ctcaacgctaaagccaagaagatcatgaagggagctcacgccaaaggaaagaagcctctg
tttgttcagcttgtcctggacaacatatggagtttatatgacgctgttgttaccagacga
gacaaggagaagatagagaagatgatgatgtcactaggtgttaaggtgatgaccagagac
tcgcgtcactccgaccccaaagtcctcctctctgccatctgcagccagtggcttcccgtc
tcacaggctgtgctgttcatggtgtgtgataagctgcccagtccgttggacatgacctct
gagagaatagagagactgatgagtgtgggagcacgcaggttccactcactacccctgcag
acccaggaactgaagaccgccttcatgcagtgttccagtgatgacacagcccctgtcatt
gtgtttgtgtccaagatgtttatggtggaagccaaggccctgcctcagaacaaacagagg
ccgttgacccaggaggagatggcccagcgcagggagctggccagacggagacacactgag
agactggcagccattcagcagacggaaagtggggagggaaatgcccaatcaggaagtaca
acaccggcaaccactcctggtggagacatcaccataggtagtgagggtgtctcaggccag
atacagggcctgcctctgaaggctaaaccagaggaggaggaggggaaagagacgttcgta
gccttcgccagagtctacagcggggtggtccgcagaggacagaaggtgtttgtgatgggg
cccaagtacgaccctgcacaaggcctgcgcatgctcccagagggcagtactagtgtgagt
gcctgtctccctcccgtccctcacctggcctgctgcaccatggacagcctctacctgctg
atgggcagagagctggaggaactagaggaggtgccatcagggaacgtactgggtattggc
ggtctcgaggaatgtgtgttgaagtctgcgaccctctccacctcccctgccctcccccct
ttcatccccctcaacttcgaagctacgcccatcgtacgagtggccatcgaacccaaacac
ccaagtgagatgcctaagctggtacggggtatgaggctgttgaaccaggctgacccgtgt
gctgaggttctgatccaggagacaggagaacacgtactggtcacagccggggaggtccac
ctgcaacgctgtctggacgacctccgagagaggtttgccaagattgagatcagtgcctcc
aagcctatcatcccattcagagagaccgtgatcagaccacccaaagtggacatggtcaat
gaagacctgggaaaacaacagaaggtggcggtgatccaccaggtgaaagagtcagacacc
ctgcacctggaccccagcggcctggtgactctcaccacccccaacagacaggccaccgtg
ggggtacgggccataccactacccgaagaggtgactcttctactggagggtagtgctgac
ttgatccggaccctggagcaggcaggtcaggcccagagggaggggaggaccctggacatg
agtacctggaccctagatgccctgatggtgctgaagagcaggctggaggtcctgctgcag
gggaggaagtggaggaacgctgtggaccggatatgggcctttggaccacgcaggtatgga
ccaaacatcctccttaacagcgtagaggggtaccagagaccatccgtgtggcactgcctc
gaacgagagaaaggagagaaagagggaggggcgaaagctgaggccagcgccatccgagac
tttgacaacagcgttgtcagcggtttccagcttgccaccctctctggtccaatgtgcgag
gagcccctcatgggcgtctgcttctctgtggagagatgggacatgaacttccccacccag
cgcacccacctggactctgtgactgaagaagactccaactcccttgatgcatctgtttcc
gaaagccccggtgaggctgcaggtcagcaggtggcctcaggcaaggcagggggagcgggt
gagacgccttcccaggcagagggagccgtggctggggcgagccaggggagacgcagggcg
gaggttgtggccgggctagtggactgctacgggccgttctctggccagctcatagctgct
gtgaaggaggcttgtcggcacgcgttccaggccaaacctcagagactcatggctgctatg
tacacctgtgaaatcatggctacagcagaggtgttaggtcgtgtgtacggggtcctgggg
aagagggagggccgagtgttacaggaggagatgaaggaggggacggagatgttcatcatc
aaggccgtccttcctgtggccgagagcttcggattcgctgatgagatacgcaagagaacc
agtggattggctagtccacaactgatattcagccactgggaggtgatctccagtgatccg
tcctgggttcctaccacagaagaggagtacctccactttggagagaaggctgattccgcc
aatcaggctctgaaatacatgaacggtgttcggcggcgtaaaggtctgtacgtggaggag
aagatagtggagcacggcgagaaacagagaacactgagcaagaacaaatag
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