Oncorhynchus gorbuscha (pink salmon): 124033517
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Entry
124033517 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
124033517
NCBI-ProteinID:
XP_046201493
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Position
LG04:2109309..2148775
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AA seq
1182 aa
AA seq
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MTEENIIFFGDLEYTGNILLGENQAGRSGLRPKAATVMVWRAGLLLSILLATATHTMSAS
FPEDSIPLDAVDAHFSRQYPVFRGRPSGNESQHRLDFQLMTKIQDTLFIAGRDQVYLVSL
RESYRNEIIPYRKLTWRSGEADRKNCAMKGKHRDECHNYIKVLVPRNDDLVFICGTNGFN
PMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVALFADGKLYSATVADFLASDAVIYRSM
GDGSALRTIKYDSKWLKEPHFLHAVDYGNYVYFFXTAEHNNLGKAVYSRVARICKNDVGG
SQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQSITDIININGVPSVVGVFTTQMNSIPG
SAVCAFSMDDIETVFRGRFKEQKTPDSVWTAFPEERLPKPRPGCCAGHGQAESYKTSIEF
PDETLLFIKSHPLMDSSVPNIGDEPWFTKTRVRYRLTALAVDNAAGPHGNYTVLFIGSEA
GVVLKVLAKTSPLSLNDSILLEEIDLFNRAKCLSNSEDDRHILSLHVDRDTHSVYVAFSS
CVVRMPLSRCERHTNCHKSCIASRDPYCGWMPHGACERILPGVLTGYEQDVEFGNTVQLG
DCHVFLATTSATDYKSFGDPTSDMELSSTSFTDQPSGPIHPPVPPVLTPTLSPHPGFGPG
EGPGLGPGAGFPDLYGSGFVQQDDPATSHSLESLPGGLEGVWEIQAGEANQMVHMNILIS
CVLAAFLLGALVAGLVVFCYRDSFLRHKPRHAHKDAESAPSCSDSTGSFAKLNGLFDSPV
KEYQPSLDCPKLYTNLLSSGKDLTPNGDTKTMILRDGCQPPXLAALPTPESTPVLQQKGL
QPIRNQWERANHHGKINGSRKNSNSTSSSIAKSPQFHPSSPPPHPQPHAHPALGHSHIPS
AVVLPNATHEYRSGYHGNPTDDVTPPRTLDRKPENMEHLQATPPHSKGSRKEQKRSLDAR
NTLNDLLKHLNDANTANASSKAILQEGAGSAPRPSRQHLMLEPLGDITEVPPKVPSREAS
LYSPSSSSSLPRHSPTKRVDVPLPSTPSSPTGSLGMGGSMSGTLERRYGSHHRISSHRHS
LTATSPNGVSMGVSLSHQHSMNRGGYMPPTPPSRLDSQRGLHSPHQHPHPPSLSRQSSYS
GHGSLPRQGLKRTPSLKPDVPPKPNAFTPQTPQMRVVNKYSY
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggaaaatataattttctttggcgatttagaatatacaggtaacatcttgttg
ggtgagaaccaggcaggaaggagtggtctcagaccaaaagcagcaacagtcatggtttgg
agagcaggccttctgctcagcatactgctagctacagccacacacaccatgtctgccagc
ttcccagaggacagtatacccctggacgctgtggatgcacacttctcgcggcagtaccca
gtgttccgaggtcgtccgtcggggaacgagtcacagcacagactggacttccaactgatg
accaagatacaggatacactgttcatcgctggcagagaccaggtgtatctagtgagtctc
cgagaatcctacaggaatgagatcattccctacaggaagttaacatggaggtcaggcgag
gcagacagaaagaactgtgccatgaaggggaaacacagagatgagtgtcataactacatc
aaggttctggttcccagaaatgatgacctggtgttcatctgtggaacaaacggcttcaac
cccatgtgccggtactacaggctggataacctggagtttgatggggaggaaatcagcgga
ctggcacgatgcccgtttgacgccaagcagaccaacgtcgctctgttcgctgatgggaag
ctgtactcggcaacggttgctgacttcctggcgagcgacgcagtgatctaccgtagtatg
ggtgacggctcggccctcaggactatcaaatacgactccaaatggctgaaagagccccat
ttcctgcatgcagtggattatgggaactatgtctacttcttctagacagcagaacacaac
aacttgggcaaggccgtctactccagagtggctcgtatctgtaagaacgacgtaggcggg
tctcagcgtgtgttggagaaacactggacgtccttcgtcaaggccagactcaactgttct
gttcctggagaatccttcttctacttcgatgttctacagtccatcactgacatcatcaac
atcaacggagttccttctgtggtgggagtcttcactacacagatgaacagtatcccaggg
tctgcagtgtgtgcgttctccatggatgacatagagacggtgttcagaggacgatttaaa
gaacagaaaacacctgactctgtctggaccgccttcccagaggagagactgcccaaaccc
aggccaggctgctgtgcgggccacggccaggctgagtcctataagacctctatagagttc
cctgatgagaccctcctcttcatcaagtctcaccccctcatggactcctccgtgcctaac
ataggagacgagccctggttcaccaagacacgcgtcaggtacaggctgacagccctggcg
gtggacaacgcggctggtccacatggtaactacacggtgctgttcattggttcagaggcg
ggcgtggtgctgaaggttctagccaagacttcccctctgtccctaaacgacagcatccta
ttggaggagattgacctgtttaacagagccaagtgtctgtctaacagtgaggatgacagg
catattttgtcgctccatgttgacagagacacacacagtgtgtatgtagctttctcaagc
tgtgtggttcgcatgcctctcagccgctgtgagcggcacactaactgccacaagtcttgt
atagcgtccagggacccctactgtggctggatgcctcatggagcctgtgagaggatcctg
cctggagttctgactggttatgagcaggatgtagagtttgggaacacggttcagctggga
gactgccatgtgtttttggccactacatctgcgacagattacaaatcatttggtgacccg
acctctgacatggagttgtcatctacgtcattcacagaccagcccagtgggcccatacac
cccccagtacccccagtactcacccccaccctgagcccccatcctgggtttggtcctggg
gaagggcctgggttggggcctggggctggttttccagacctgtatggctcagggtttgtg
cagcaggatgacccggccacctcccattcactagagtcactcccagggggcctagagggt
gtgtgggagatccaggcgggagaagccaatcagatggtccacatgaatatcctgatcagc
tgtgtgttggctgccttcctcctgggtgcgctagtggccggcctggtggtgttctgctac
agagactccttcctccgccacaagccccggcacgcccacaaggatgcagagtcagccccc
tcctgcagcgactccaccggatccttcgctaagctcaacgggctcttcgacagtcctgtc
aaggagtaccagccaagtctggactgtcccaagctgtacaccaacttactgagcagtggt
aaggacctgacgcctaacggagacaccaagaccatgatcctccgggacggctgtcagccc
ccgnagctggccgccctgcccacccccgagtctacccctgtgctgcagcagaaaggcctg
cagccaatcaggaaccaatgggagcgagccaatcaccacgggaagatcaacggatccagg
aagaactccaactctacctcctcctccattgccaagagtccccagttccaccccagttcc
ccccctcctcacccccagccccacgcccaccctgcgctgggacactcccacatccccagc
gccgtcgtccttcccaacgccacgcacgaataccgcagtggttaccatggaaacccgacc
gacgacgtcacgccgccgcgcaccctggacaggaagccagagaacatggaacacctgcag
gccacgccccctcattctaaaggaagcaggaaggagcagaagaggtcgctggatgccagg
aacacactgaacgacctgctgaagcacctgaacgatgctaacacggctaacgctagctcc
aaggctatcctccaagagggggccggctcagcgccccgacccagcagacaacacctgatg
ctggagcctctaggggacatcactgaggttccccccaaggtccccagccgagaggcctct
ctttactccccctcctcctcctcctctctgcccaggcacagccccaccaagagggtagac
gtcccactgccctccacccctagctcccccacaggcagcctgggtatgggaggaagcatg
agcggcaccctggagaggaggtacggctctcatcacaggatctcttctcacagacactca
ctcaccgccacctctcccaacggggtcagtatgggggtgtcgttgtcccaccaacacagt
atgaacagaggggggtacatgccccccacccctccctccagactggactcccagaggggg
cttcactccccccatcaacacccccaccccccctccctgtcccgccagagcagctacagt
gggcacggctcgctcccccgccaggggcttaaacgaaccccgtccctaaagcctgacgtc
ccccctaaacccaacgccttcaccccacagactcctcagatgagggtggtcaacaagtac
agctactag
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