KEGG   Oncorhynchus gorbuscha (pink salmon): 124033544
Entry
124033544         CDS       T07892                                 
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
  KO
K16482  centriolar protein POC1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ogo03036]
    124033544 (poc1b)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ogo03037]
    124033544 (poc1b)
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    124033544 (poc1b)
Cilium and associated proteins [BR:ogo03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   124033544 (poc1b)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SCAP WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_NUP159_NUP214 eIF2A Beta-prop_IFT122_2nd Beta-prop_WDR75_2nd Cytochrom_D1 RMC1_N THSD1_N DUF6986
Other DBs
NCBI-GeneID: 124033544
NCBI-ProteinID: XP_046201538
LinkDB
Position
LG01:complement(15366621..15438345)
AA seq 509 aa
MASVMEDPTLERHFKGHKDAVTCADFNSKHKQLASGSADKTLMIWNLNPKARAFRFFGHK
DVITGVQFSPAGDLVVSASQDKTVRLWTPSIKGESMVFKAHTATVRSVSFSHDGQRLVTA
SDDKSVKVWSVHRQRFVYSLNQHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSTKQCIN
CFTEYGGSATFVDFNTSGTCIASSGADNTLKIWDIRTNKLLQHYQVHSSGINCFSFHPSG
NYMISGSSDSTVKILDLLEGRLIYTLHGHKGPVLAVAFSRGGDFFASGGCDAQVLMWKTN
FDSFDYREVLSRHSQRVSPDPPPHLTDIYPRGPHLHSAQSGAIEISPMVADTQTTAPAVI
EVGQTLYTATTAVNGHANNLPARRIASTSLNPNEDCHSSGQDSTSGSQSGQMGGRREEEQ
GMMYPLEVCSDLPMNFSSTLERIVQQLDVLTQTVSVLEERLTLTEDKLKECLFNQSQILL
QVRGEEKDRRRERVEEEWEGESGSPVASA
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcatcagttatggaggaccccaccctcgagcgacacttcaagggccacaaagatgct
gtcacctgtgcagacttcaattccaaacacaaacagctggcctcagggtctgcagataag
accctgatgatttggaatctgaaccctaaggccagggcgttccgtttttttggacacaaa
gatgtcatcacaggggtccagttctcccctgcaggagatctggtcgtctctgcatcccag
gacaagactgtacggctgtggacgcccagcattaaaggagagtcgatggtgttcaaagcc
cacacggctacagtacgcagtgtcagcttttctcacgacggccagaggctagtgactgcg
tcagacgacaagtctgtcaaggtgtggagtgtccacagacaacgttttgtctactcactc
aaccagcacaccaactgggtccgctgcgccaggttttctcctgacggccgtctaattgcc
tcctgtggtgatgaccgcacagtgcgactgtgggacacctccaccaaacagtgcatcaac
tgctttacagagtatggaggatcagcaacatttgtagacttcaacaccagtggcacctgc
atagcatcctcaggagcagacaacacgttgaagatctgggacatacggacaaacaaactg
ctccagcattaccaagtccacagttcagggatcaattgcttttccttccacccgtctgga
aactatatgatcagtggctccagtgacagcacagtgaagatcctggacctgctggaggga
cgcctcatctacaccctccacggacacaagggtcctgtcctggctgtggccttctccagg
ggaggagacttctttgcctcagggggttgtgatgctcaggttttaatgtggaagaccaac
tttgattcttttgactaccgtgaggtcctgagcagacacagccagcgggtcagccccgac
ccccctcctcacctgacagacatctaccctcgaggaccacacctccactccgcccagtct
ggggctatagagatcagtcccatggtggcagacacccagaccactgccccggctgtcata
gaggtgggccagaccctctacacagccactacggctgtcaacggccatgcaaacaatttg
ccagcacggcggattgccagtaccagcctcaaccccaacgaagactgccacagtagtgga
caggattcgacatctggttcccagtccgggcaaatgggaggcaggagggaggaggaacag
gggatgatgtaccctctggaggtgtgctcagacctccccatgaacttcagcagcaccctg
gaacgcatcgtccagcagcttgacgtcctcactcagactgtctctgtgttggaagaacgt
ctcaccctgacggaggacaaactgaaggagtgtttattcaaccagagtcagatcctgctg
caggtgcgaggggaggagaaggaccgaaggagagagagagtggaggaagagtgggaaggt
gagagcggatcccctgtcgcctcagcctaa

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