Oncorhynchus gorbuscha (pink salmon): 124033583
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Entry
124033583 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04217
Necroptosis
ogo04622
RIG-I-like receptor signaling pathway
ogo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124033583
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124033583
04625 C-type lectin receptor signaling pathway
124033583
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124033583
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124033583
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124033583
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C67
124033583
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124033583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
124033583
NCBI-ProteinID:
XP_046201605
LinkDB
All DBs
Position
LG04:complement(7894955..7926332)
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AA seq
960 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PSKGKRSIRVLDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
INCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVILVEEEMDFHPLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFTPRGSSSDKSSSGQSKPKSKGLGLQCGSRSKSELYYTLNGSSVD
HPVQAKSKSTWYIDEVGEDPAKSLTDTPPDFNETTPPTRAPPSASLSNDNKFHSLPFSLS
RKTGPNGSMCHGPLSLSVQSVMGEQMPEPPLPSPPSPRPPSPPSSRGGGGVPGLEVGSLV
EVKENPPLCGVIRWVGLPPGLPEPLAGLELEEECVGCTDGTFQGTRYFNCAPKKALFVKL
KCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKKGIQG
HYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCA
TKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRTAGQKVQDCYFYQ
IFMDKKDKVGVPTSQQLIEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELD
ITDLLEDTPRDCRICXGLALYECRECYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHRYG
KLSVPKELQEGVWRQGSFPRQRMELFAVLCIETSHYVAFIKYGHQDSAWLFFDSMADRDG
GQNGFNIPQVSPCPEVGAYLKMTPEELHVLDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcccccccagaagaccttgaggatc
ccccggggcagcctgggacaggcctgccaggagaggaacagcctggggcgcacgctgccc
cccagcaaaggcaagaggagcatacgcgtcctcgaccagaccaacgtggtgctgagcctg
gatgagcgggacgtcctggagctggatgagaagctagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagcccaggctggagcgggccagggac
atcaactgtggctccaaggtgcgcgtgcagctgcgttcgggggatgaacctttgcccggg
gtagtccgatttaaaggatctctcctcccagacagggctctctccggggtctggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccagggccga
cagctgttccgctgtgaagatgagtgcggggtgttcgtggccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcatcctggtggag
gaggagatggatttccatccgctggagatcaactccagggtccttgtccagaccagagag
gggccggagaggggaaccatcatcttctgtgacctgctgcctgggaacgagagcctgggg
tactatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgatggg
aagctgctgtgtaatttcgccagtctggaacacacccgtctagtccccatctgtgacgta
atgccagaatactccatgcaggaccagaggctgcagaaacacagttttacccccagaggc
agcagcagtgacaagtcctcctctggccaaagcaaaccaaagagcaaaggcttaggtctt
cagtgtgggagtagaagcaagtcagaattgtattatactttaaatggcagctctgttgac
cacccagtccaggccaaatccaaaagcacatggtacattgatgaagtaggggaagaccct
gccaagtccctcacagacacgccccctgacttcaatgaaaccacacctcctaccagggcc
ccgccctctgcttccttgtccaatgacaacaagttccactccctgcccttcagcctgagc
cgtaagactgggcccaatggcagcatgtgccatggacccctctcgctctccgtgcagtca
gtgatgggagagcagatgccagagcccccattgcccagccctccctccccgaggcccccc
tcaccccccagctctcgcgggggtgggggagtgcctggtctggaggtggggtccctagtg
gaggtgaaggagaacccgcccctgtgtggggtcatccgctgggtggggctccccccggga
ctaccagagccactggctggcctggagctggaggaagagtgtgttggctgtacagacggc
acctttcaaggtacccgttacttcaactgcgcgcccaagaaggccctgtttgtgaagctg
aaatgttgccggccggactcccgtttcccctccctacaccactcctccaaccccattgag
agatgcaactctatcgctttcgggggttatctgagtgaggtggtgcatgagaacactcct
ccacgcactgagaatgacggtctagacatcatggtgggcaagaagaaaggtatccaggga
cactacaactcctgctacctggactctacactcttctgcctgttttccttcagctcagtc
ctggacacagttctgctgaggccgaggtccaagactgacgtagagtattaccgagagaca
caggagctgctacgcacagagatagtcaaccccctgcgcatacatggctatgtgtgtgcc
actaaagtgatgaagctcagaaggatactggagaaggtagaagctgcctcagggttcaca
tctgaagaaaaagatcctgaggagttcctcaatattctgttccatcacatattgagggtg
gaccccttactcaagctgaggacggcaggtcagaaggttcaggactgctacttctaccag
atcttcatggataagaaggacaaagtgggcgtgccaaccagccagcagctcatagagtgg
tccttcatcaacagtgacctcaagtttgctgaggctccttcctgccttatcatccaaatg
cctcgctttgggaaggacttcaagatgttcaacaagatcttcccctcactagagttagac
atcacagacttacttgaagacactcccagggattgtcgaatctgcnggggtctggctctg
tatgaatgcagggagtgctacgaggacggtgacatcactgccgggaagataaaacagttc
tgtgaaaagtgcaatacacaggttcacctccacccgaggaggaaggcccatcgctacggc
aagttgtccgtccccaaggaactgcaagagggtgtgtggcggcagggtagcttccctcgc
cagcggatggagctgttcgctgtgctctgcatcgagaccagtcactacgtagcgttcatc
aagtacggccaccaagactctgcatggctcttcttcgacagtatggccgaccgcgacgga
gggcagaatggcttcaacatcccccaggtgtctccatgtccggaggtgggggcctatctg
aagatgacccctgaggagctgcacgtcctggaccccaagagcatccagggccaggcccgc
cgtctgctgtgtgacgcctacatgtgcatgtaccagagccccaccatgagcctgtacaag
tag
DBGET
integrated database retrieval system
