Oncorhynchus gorbuscha (pink salmon): 124033592
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Entry
124033592 CDS
T07892
Name
(RefSeq) Wilms tumor protein 1-interacting protein homolog
KO
K16682
LIM domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
124033592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124033592
03036 Chromosome and associated proteins [BR:
ogo03036
]
124033592
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124033592
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
124033592
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
124033592
NCBI-ProteinID:
XP_046201627
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All DBs
Position
LG04:8307647..8350387
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AA seq
700 aa
AA seq
DB search
MDHYEEDLGLRASKLMEDLSLYEAYKDGMYSSRRDMVINPDLDFSSTTIPEQKSKTMNGS
SAPHQQIHSVENYMSGNKVYTAAPVRPVNGNRAVPVDYCTPQRDTVYPNEDSYCTKSEIA
LPCYSGASERHRRYSLEVQGHRYSTGSAYDGLVLNKPVPSPGNRCNSICITTNNDGRYNA
TSPRSSFVSSLSSQEQSKHASPRSSISSPRTSLLVPGQDKYTSPRSSLVHCEGSSALSPR
SSYASTASDTSKHSSPRASLNSYDCCSKPSSNRTSGISMGYDQRHISPRSSTASQYSCTT
SPRSSYSDSRYMPVGNHDLEGAVLHGMPVASPRSSICSQDGCARPGTIANCVVSPRSSIS
SHSSRSSRSSRGSMSTYPDLPLPSPRSSMLGTGLQEDILTQDCGDTNGVHSRIHLQALSG
MPEALPQHAPQQSTQAGMNTGASGQRFKLPYQVTPCRESGPSQAERSLEALTLELEKELE
MHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFTCYSCGRRLRGKAFYNVNGKVYC
EEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCVVCTEGLDGVPFTVDVEN
NIYCVKDYHTVFAPKCASCNQPILPPQGSEETIRVVSMDKDYHVECYHCEDCGLQLNDEE
GHRCYPLDCHLLCHGCHIRRLKVPVPTHPPPSYPLHVTEL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggatcactatgaggaagatttgggactccgggcgagtaaattaatggaggacctttcc
ttatatgaagcatacaaggatggaatgtacagttcaaggagggacatggttatcaacccc
gatttggatttttcgtctacaacgatacccgagcagaaaagtaagacaatgaatggcagc
tctgcgcctcaccaacagatacacagcgttgagaattacatgtctgggaataaagtgtac
actgcggctcccgtgcgccccgtgaatggcaacagagccgttcctgtggattattgcacc
cctcaaagagacacagtttatcctaatgaagatagctattgcaccaaatccgaaattgct
ttgccgtgttatagcggcgcctccgagcggcacaggaggtactcattggaggtgcagggg
cataggtacagcactggtagcgcgtacgatggactggttttgaacaagccagtaccctca
cctggcaacagatgcaacagtatttgtattaccaccaacaacgacggcagatacaatgca
accagcccgcggtccagtttcgtatcctccctctcctcccaggagcaaagcaaacatgca
agcccgaggtcgagcatcagtagcccgcgcacgagtctgttggtacccgggcaagacaag
tacactagtcccaggtccagtctggtacactgtgaagggagcagtgccctcagcccccgg
tctagctatgcaagtacagccagcgacacaagtaaacattccagcccaagggccagtctg
aacagctatgactgctgcagtaagcccagcagtaaccgcaccagcggcatcagtatgggc
tacgaccaaaggcacatcagccccaggtccagcacagcgagccagtattcttgtaccacc
agtccacgctctagctattcagattcgcgttacatgcctgtggggaaccatgatctggag
ggtgcagttttgcatggcatgccggtggccagtccccggtcaagcatctgcagccaggac
gggtgtgcaagacccgggacaatagcgaactgcgtcgttagtccccggtccagtatctcc
agtcacagttccagaagttcccggagctccaggggatctatgagcacctacccagatctc
ccactgccttcacccaggtcctcaatgctggggactggtttgcaggaggacatactaaca
caagattgtggcgataccaacggtgttcatagtcgtatccatctccaagcgctctctggg
atgccagaggccctgccacagcatgcaccacaacagtcaacccaggcagggatgaacaca
ggagcctcagggcagaggtttaaactaccttaccaggtgaccccatgccgggaaagtggc
ccaagccaagcagaaaggagtctggaagcactcaccttggagctggagaaggagttagaa
atgcacatgaaaaaagaatactttggtatctgtatcaagtgtgggaaaggtgtgtatgga
gccagccaagcctgtcaggccatggggaatttgtaccataccaactgcttcacctgttac
tcctgtgggaggaggctgagagggaaagctttctacaacgtcaacggcaaggtctactgt
gaagaggacttcctgtactctggctttcagcagacggcagagaagtgctttgtatgtggt
cacctcatcatggaaatgatcctgcaggcactaggcaagtcctaccaccctggctgcttc
cgctgtgtggtctgcacggagggtctggacggagtacctttcactgtggacgtggagaac
aacatctactgtgttaaagactaccacacggtctttgcccctaaatgcgcctcatgcaac
cagccaatcctccctcctcagggctctgaggagaccatccgggtggtgtccatggacaag
gactaccatgtggagtgctatcactgtgaggactgtggcctccagctaaatgacgaggag
ggtcaccgctgttaccccctggattgccacctgctctgtcacggctgccacatccgcagg
ctaaaggtcccggtgcccacccacccgccccccagctacccactacacgtcactgagctg
tga
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