Oncorhynchus gorbuscha (pink salmon): 124033599
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Entry
124033599 CDS
T07892
Name
(RefSeq) leucine-rich repeat-containing protein 49-like isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124033599
04812 Cytoskeleton proteins [BR:
ogo04812
]
124033599
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
124033599
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
124033599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
124033599
NCBI-ProteinID:
XP_046201639
LinkDB
All DBs
Position
LG04:complement(8926289..8986823)
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AA seq
843 aa
AA seq
DB search
MRPQRQQTNNNAAITGRCLSPTVNSYKLHFTAVNSQIPERNVQRPLDVRWSKDFTNGINM
DTMKMNPPRQDSRLNADSGGGRPLHTPVLAFVSEFMGPERPLLPPAAALPRGLTGDLGPQ
PHRVKPRRATNSAGAINSHSTSPLTLPTGPGDAISLSENSPSSFPIAFRSRDDSALSPER
LDLDRRGLEECPLLEGMGRLRLLNFQHNLITHIHNLSHLRHLAFLDLYDNHIAQMSGISA
LASLRVLMLGKNRIQRICSLDNLTKLDVLDLHGNQISQIENLSHLSELRVLNLAGNCISR
VDNLQGLDSLTEINLRRNCISTVTEVDQLPCLQRLFLSCNSITSFDELACLGESCSLSEL
TLDGNPVALETWYKQAALRCVLQLRQLDMKRVTEEERRMACVTARKEDEKKRESHKQAMH
KSPAHVVPQQFYTQLGLKSQDSSVTSKEKRRLAIRNAALQWEGVRACLELPAQNGAKEEI
SPEASPAHSPAQTNGLALEPSPDEQLRRVSPVSALDRPTGGSETRIRSTSRPNSPRDPKL
LEAGGVNLQSLSLSDSHLAELDGETLRLFGLGALEALERGWGVQTAGAVTVIAFRYIHFD
AIVPTLPRIRVKFPNLSHLIFLETNVSRLPQLAALAQVRRLDQLTIHPEGNPVVSLSLWR
SFLIYRLHHFNLHKINNLEVTMNDMISAERLFGTLGHIAATETPRCRLLVLLEESRKRQL
QFLLEGRGRRAGLSPEELRDNGKLLGEGLSRALFNYPSRDCCSVGAESPEEGAMESSSEC
GAVMEQYIQAQVQRASDTNLKRESLHKLWPSMFMEMVRDCVLEMRDRPAFRQACLNRLST
QGK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgcggccacaaagacagcagaccaacaacaatgcagccattacaggaaggtgtctttct
cccacggtcaacagctataaactgcactttacagcagtgaactctcaaataccagagaga
aatgttcagagaccactggacgtccgatggtctaaagactttacaaacgggataaacatg
gacaccatgaaaatgaatccaccaagacaagacagcaggcttaatgcagacagtggcggc
ggcaggcctctccacacccctgtgctggcgtttgtcagtgagtttatgggccctgagcgt
cccctcctaccccctgctgctgctctacccagggggctgactggtgacctggggccacag
ccacacagagtgaagcctaggagagcaacaaacagtgcaggggccatcaactcccacagt
acctcacccctcaccctgccaactggaccaggtgatgccatatcattgagtgagaattct
ccctctagttttccaattgcctttcgttcccgtgatgacagtgctttgagtcctgagcga
ctagatttggacaggcgtggtctggaggagtgtcccctgctggagggcatgggtaggctg
cggctgcttaactttcagcacaacctcatcacgcacatccacaatctgtctcatctgcgg
cacctggccttcctagacctgtatgacaaccacatcgcccagatgtctggcatctcagcc
ctggcctctctcagagtgcttatgctgggcaagaacagaatccagaggatatgcagtctg
gataacctgactaaactagatgttctggacttgcatggcaatcagatctcccagatagag
aacctttcccacctgtctgagctgcgcgtgttgaacctggcagggaactgcatctccagg
gtggacaacctgcagggcctggactcactgaccgagatcaacctgagacgcaactgcatc
tccactgtgacagaggtggaccagctgccctgcctccagcgcctctttctcagctgcaac
agcatcaccagttttgatgagctagcctgcctgggagagtcctgctccctttctgagctc
accctggatgggaacccagtagccctggagacatggtacaagcaggccgccttgcgctgt
gtgcttcaactcagacagctggacatgaaacgtgtcacggaggaggagagacgtatggcc
tgcgtcacggcccggaaggaggatgagaagaagagggagagtcacaagcaggccatgcac
aagagtcctgctcatgttgtgcctcagcagttctacactcaacttgggctcaagtctcag
gactcctcagtgacaagcaaggagaagcggcgtctggccatccgtaatgcagcactgcag
tgggagggggtcagggcctgcctggagcttccggctcagaacggagccaaggaggaaatc
agccctgaggcaagccccgcccacagcccagcccagaccaatggccttgcactggaacct
tctccagatgagcagctcagacgggtgagtccggtgtcggctctggacaggccaacaggg
ggcagtgagacccggatacgctccaccagtcgccccaacagtcctcgagaccccaagctc
ctggaggcagggggtgtcaacctgcagagcctctccctgtcagacagccacctggcggag
ttggatggggaaaccctgcgcctgttcggcctcggagcactggaggccctggagagaggc
tggggggtccagactgcaggagccgtcactgtcatagccttccgctacatccactttgat
gcgatcgtgccaacactgccacgcataagggtcaagttccccaacctatctcatctgatt
ttcctggaaaccaacgtcagccgtcttccccagctggctgctctggcccaggtgagacgt
ctggaccagctgaccatccacccagaggggaaccctgtagtcagcctttccctgtggaga
tccttcctcatctaccgcctgcaccacttcaacctgcacaagatcaacaacctggaggtg
accatgaatgacatgatctctgcagagcgtctgtttgggacgctgggtcatatcgctgcc
accgagacaccacgctgccgcctgctagtactgctggaggagtccaggaagcgtcagctg
cagtttctgttggaggggcgtgggcgccgtgcaggcttgagcccagaggagctgcgtgac
aacggcaagctgctgggagagggcctgagcagagccctgttcaactaccccagtagagac
tgctgcagtgtgggagcggagagcccagaggagggtgctatggagtcgtcatcggagtgc
ggagccgtgatggagcagtacatacaggctcaggtccagagggcatctgacaccaacctg
aagagggagtccctccacaaactgtggccctccatgttcatggagatggtgagagactgt
gtgctggagatgagggaccgaccggccttccgccaggcctgcctcaacaggctctccaca
cagggaaagtga
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