Oncorhynchus gorbuscha (pink salmon): 124033721
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Entry
124033721 CDS
T07892
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124033721
03036 Chromosome and associated proteins [BR:
ogo03036
]
124033721
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124033721
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124033721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
LIM
zf-C2HE
zf-C2H2_15
zf-C2H2_ZN142
DUF7128
Motif
Other DBs
NCBI-GeneID:
124033721
NCBI-ProteinID:
XP_046201876
LinkDB
All DBs
Position
LG04:15271688..15283387
Genome browser
AA seq
770 aa
AA seq
DB search
MEGEVVSIETAQVEGLQDSGEGAELLQTAEASLMEGGVAPQEVTGNVEMMVMDTLDSTLD
PALLQMKTEVLEGGGTVTVTGGDEGQIITLQVSVVNMEGNMDQTSAALGLGQLQLVQVPV
TTATVEELQASFVDSSAGNTEAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAQD
ELQVIHGEEEEEEAEPQVEDQTWSKDPDYQPTAGIRKGKKGKKSRLRYGEGERDMDVSVY
DFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMK
SHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDCDMAFVTSGELVRHRRYKHT
FEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKP
YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFMEMG
RKCRYCDAMFHERYALIQHQKSHKNEKRFKCDQCDYCCRQERHMIMHRRTHTGEKPYACS
QCEKTFRQKQLLDMHFKRYHDPNFIPTAFVCSKCGKTFTRRNTMLRHAENCNGENTGDEN
GTLPKKGRRGRKRKMRSRRDDDDDDTEPELDDIEEEEEELLAEIEVEQAPPVVPVPAPVG
PPAKRKRGRPPKAKPAPTAAIIRVEDETTGEVDDIIVKKEMKAEQASQEEEAVEDEEPAV
EVEHAKGEPANQVEESLQGEEVVQEMALSVTEGPPNGDLTPEMILSMMDR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaagtcgtttccattgagaccgctcaggtcgagggtctccaggacagtggg
gagggtgcagagctgctccagactgcagaggcttccctgatggaggggggtgtggcaccc
caagaggtgacggggaatgttgaaatgatggtgatggacaccctggactcgacccttgac
cctgccctgctacagatgaagactgaggtccttgaagggggcggaacagtgacggtcacc
gggggagacgagggacagatcatcaccctgcaggttagtgtggtgaacatggaggggaac
atggatcagacgagtgcagcgctggggcttggacagctgcagctggtgcaggtccctgtc
actacagccaccgtggaagagctccaggccagcttcgttgactcctcagcaggcaatact
gaggcagagccagtgatctgccacaccctccctctgcccgagggcttccaggtggtgaag
gtgggggcgaatggagaggtggagacagttgagcaggaagaactgcaggcagcccaggat
gagctccaggtgatccatggggaggaggaggaggaggaagctgagccccaagtagaggac
cagacatggtcaaaagacccagattaccaaccaactgctggcatccgcaaggggaagaag
ggcaagaagagccgcctgcgttacggggagggggagcgagacatggacgtgtctgtgtat
gactttgaggaggagcagcaggaggggatgctctctgaggtcaatgctgagaaggttgtg
ggcaacatgaagccacccaaacccactaagataaaaaagaaaggtgtgaagaagacgttc
cagtgtgagctatgtagctatacctgcccccggcgctctaacctggaccgccacatgaag
agccacacagatgagaggccacacaaatgccatctgtgtgggagggccttcagaacggtc
acactgctgaggaaccacctcaacacacacacaggcactcgtcctcataaatgccaagat
tgtgacatggcatttgtgaccagtggagagctggtgcgtcatcgtcgctacaaacacaca
tttgagaaacccttcaagtgctccatgtgtgactacgctagtgtggaggtgagtaagctg
aagagacacatccgctcccatacaggcgagaggcccttccagtgcagtctgtgcagctac
gctagccgagatacctacaaactgaagagacacatgaggacacactcaggtgagaagcca
tatgagtgctacatctgccatgctcgtttcacgcagagcggcaccatgaagatgcacatc
ctgcagaagcacacagagaatgtggccaaattccactgcccccactgtgacacagtcatc
gcccgcaagagcgacctgggtgtgcacttgcggaagcagcattcgttcatggagatgggc
aggaagtgtcgttactgtgacgctatgttccacgagcgttacgcactcattcaacaccag
aaatcccacaagaacgagaagcgcttcaagtgcgaccagtgtgactattgctgcagacag
gagcgtcacatgatcatgcacagacgtacacacacaggggagaagccgtacgcctgcagc
caatgtgagaaaactttccggcagaagcagctgctggacatgcatttcaaacgttaccat
gatcccaacttcatccccactgccttcgtctgcagcaagtgtggcaagacctttactcgc
aggaacaccatgctgcgtcacgcagagaactgtaacggagagaacactggtgatgagaac
ggaaccctgcccaagaaaggccgccgcggcaggaagaggaagatgcgctccagacgggat
gacgacgatgacgacaccgagcctgagctggatgacattgaggaagaggaggaggagctg
ctagctgagattgaggtggagcaggcaccaccggttgtccctgtccctgcccctgttggc
ccgccagccaagaggaaacgtggaagacctcccaaggccaaacctgccccaacggcggca
atcatccgggtggaggatgagaccacaggcgaggtggatgacatcatcgtgaagaaagag
atgaaagccgagcaggcgagccaggaggaagaagctgtcgaggatgaggagccagcagta
gaggtggagcatgccaaaggagaacctgccaatcaggtagaagagtcactccagggggag
gaggtggtgcaggaaatggcactgtctgtcacagagggtccccccaacggtgacctcact
cctgaaatgattctcagtatgatggaccggtga
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