Oncorhynchus gorbuscha (pink salmon): 124033754
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Entry
124033754 CDS
T07892
Name
(RefSeq) AP-1 complex subunit gamma-1-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124033754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124033754
Membrane trafficking [BR:
ogo04131
]
Endosome - Golgi transport
Others
AP-1 complex
124033754
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
Kinetochor_Ybp2
Motif
Other DBs
NCBI-GeneID:
124033754
NCBI-ProteinID:
XP_046201930
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Position
LG04:16278842..16309396
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AA seq
820 aa
AA seq
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MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLG
YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQG
LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK
NLLSEKNHGVLHTSVVLLTEMCERSPDMLLHFRKNEKLVPQLVRILKNLIMSGYSPEHDV
SGISDPFLQVRILRLLRILGRSDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIM
DIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDL
DVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCDPEFKADCASGVFLAAEKYAPSKRW
HIDTIMRVLTTAGSYVRDDSVPNLIQLITNSVEMHAYTVQRLYKALLDDISQQPLVQVSS
WCIGEYGDLLVSGQCEEEEPIQVTEDEVLDVLEGLLVSNLSTPVTRGYSLTAIMKLSTRF
SSVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPIMEKTASNGPTEI
MQTNGETEPSVPDTKHLPLVTQPANQALDLLDLLGGNDVVPVIQTTLPTKPVSAGGELLD
LLGDLSLSGGLAPAPSVPVSQPPFLLDGLSSQPLFNDTSAAIPPMTAYGKNGLKIEFTFE
RANPNPNIAVITIHATNATEADMTEFVFQAAVPKTFQLQLLSPSSNIVPALNQGSVTQVI
RVLNPQKQQLRMRVKLTYTHKGSPVQDLAEVNNFPPQSWQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgccgatcagactgcgggagctgatccggaccatccggacggctcggacccag
gcagaggagcgtgagatgatccagaaagagtgtgctgccatacgctcgtccttcagagag
gaagacaacacttaccgctgtagaaatgtggctaagctactctacatgcacatgctgggc
tacccagcgcactttgggcagctggagtgcctgaagctgattgcgtcccagaagttcact
gacaagcggatagggtacttgggagccatgctactgttggacgagaggcaggacgtccat
ctactaatgacaaactgcatcaagaatgatctgaatcacagcacacagtatgtccagggc
ctggccttgtgcaccctgggctgcatgggctcctcggaaatgtgtcgagacctggctgga
gaggtggagaagctgctcaaaacctccaactcctacctgaggaaaaaggcggcgttgtgt
gcagtccacgtcatcaggaaagtcccagagttgatggagatgttcctcccagccacaaaa
aacctgctgagcgagaagaaccacggtgttctccacacttctgttgtcctcctcactgaa
atgtgtgaaagaagtcctgacatgctcttacacttcagaaagaatgagaagttggttcca
cagctggtgagaatcctgaagaacctgatcatgtctggttactctcctgagcatgacgtg
tctggcatcagtgaccccttcctgcaggtgcggatattgagactattgcgaattctgggc
aggagtgatgatgactcaagtgaagcaatgaatgacattcttgcacaggtggcaaccaac
acagagacaagtaaaaatgtaggcaatgcaatcctctacgagactgtactgaccataatg
gacatcaagtcagaaagtggattgagggtgttggctatcaacatactggggcgcttcctt
ctcaacaatgacaaaaatattagatatgtggcactgacgtccctactgaagactgtacag
acggaccacaatgcagtgcagaggcatcggagcaccattgtggactgtctaaaagacctg
gatgtgtccatcaagaggcgtgcgatggagctgagcttcgccctggtgaatgggaacaac
atccgaggcatgatgaaggagctgctctacttcctggactcctgtgacccagaattcaaa
gcggactgtgcgtccggagtcttcctggctgcagagaagtatgcgccttcaaaaagatgg
cacattgacaccatcatgagagtcctgacaacggcggggagctatgtccgagatgactct
gtccccaacctcatccagctcatcaccaacagtgtggagatgcatgcctacactgtgcag
agactctacaaagccctgctggatgacatctcacagcaaccactggtccaggtgtcatcc
tggtgtataggggagtatggagacctgctggtatctggacagtgtgaggaggaggagccc
atccaggtgacagaggatgaagtcctggatgttttggaaggtcttcttgtgtccaacttg
tccacccctgtaacccgtggttactccctcactgccatcatgaagctgtctactcggttc
agcagtgtcaaccgaatcaagaaggtggtgtcaatatacggcagcagcatcgacgtggaa
ctgcaacagagagctgtggagtacaatgcacttttcaagaaatatgatcacatgaggcct
gcgttactggagcgaatgcccatcatggagaaaactgcctccaatggccctacagagatc
atgcagaccaatggggagacagagccctcggtgcctgacacaaaacacctgcccctagtc
acccagccagccaaccaggctcttgacttgttagacctgttgggaggtaatgatgtggtg
cctgtgatccaaaccaccctgcccaccaagcctgtctcagctggaggagagctgctcgac
ctactgggggacctctcactgtctggtggtctagctcctgctccctctgtgcccgtctcc
cagccccccttcctcctggatggcctctcctcacagcccctgtttaatgatacttcagca
gctattccccccatgacagcatatggcaagaatggcctgaaaatagagttcacctttgag
agggccaacccgaatccgaacatagcagtcatcactatccacgccaccaacgccaccgag
gctgacatgacggagtttgttttccaggctgcagtaccaaagacattccagctgcagctc
ttgtcccctagcagtaatattgtcccagcactcaaccagggaagtgtcacacaggtcatc
agagttctcaacccacagaagcaacaactccgcatgagggtcaagctgacgtacacccac
aaaggctcacctgtccaagacctggccgaggtcaacaactttcctcctcagtcctggcaa
tga
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